RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 RSBN1Q5VWQ0 802 aaPredicted RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 SLC22A10Q63ZE4 541 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TNFAIP8L2Q6P589 184 aaPredicted RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 ZCCHC12Q6PEW1 402 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PODNL1Q6PEZ8 512 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PHC2Q8IXK0 858 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 UBQLNLQ8IYU4 475 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 CDK20Q8IZL9 346 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 FAM109AQ8N4B1 249 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 C19orf18Q8NEA5 215 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 C17orf47Q8NEP4 570 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 GPR32P1Q8NGA4 272 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 OR4K5Q8NGD3 323 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 HTRA1Q92743 480 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 EXOSC8Q96B26 276 aaKnown RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 AMDHD1Q96NU7 426 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 IL4I1Q96RQ9 567 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 RHNO1Q9BSD3 238 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TRAF4Q9BUZ4 470 aaPredicted RBP9.43□□□□□ -0.9
COL5A1-202ENST00000371820 GLIPR2Q9H4G4 154 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 INPP5EQ9NRR6 644 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 INIPQ9NRY2 104 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 PLSCR2Q9NRY7 297 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 TINAGQ9UJW2 476 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 MEMO1Q9Y316 297 aa9.43□□□□□ -0.9
COL5A1-202ENST00000371820 A0A1B0GTH9 108 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 OR14I1A6ND48 311 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 KDM4EB2RXH2 506 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 E9PLN8 166 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 PGRMC2O15173 223 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 AKAP8O43823 692 aaKnown RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ERAL1O75616 437 aaKnown RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 OR5F1O95221 314 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ATP1B1P05026 303 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 TPOP07202 933 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 FBXO45P0C2W1 286 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 HLA-DMAP28067 261 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 PTGER1P34995 402 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 RFC3P40938 356 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 MTNR1AP48039 350 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 NCBP2P52298 156 aaKnown RBP eCLIP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 TAS2R41P59536 307 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 HSPB3Q12988 150 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 RIN1Q13671 783 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 CEBPEQ15744 281 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 SSX1Q16384 188 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 HYAL4Q2M3T9 481 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF791Q3KP31 576 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 RNFT1Q5M7Z0 435 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 LCN1P1Q5VSP4 162 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 BICRALQ6AI39 1079 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 TMEM211Q6ICI0 200 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 DGAT2L6Q6ZPD8 337 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 GDF7Q7Z4P5 450 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 CDH24Q86UP0 819 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 GID4Q8IVV7 300 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 LRRC25Q8N386 305 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 VWA5B2Q8N398 1253 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 OR52I1Q8NGK6 324 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 OR52N1Q8NH53 320 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 GRPEL2Q8TAA5 225 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 FAM57AQ8TBR7 257 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 SLC7A13Q8TCU3 470 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 PAQR8Q8TEZ7 354 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 OTULINQ96BN8 352 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 C1GALT1C1Q96EU7 318 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF486Q96H40 463 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ZNF582Q96NG8 517 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ARHGDIGQ99819 225 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 KCNS3Q9BQ31 491 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 VKORC1Q9BQB6 163 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 ACTRT3Q9BYD9 372 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 TTTY12Q9BZ98 90 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 OR10A5Q9H207 317 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 KCNN2Q9H2S1 579 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 TP63Q9H3D4 680 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 FN3KQ9H479 309 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 NEK6Q9HC98 313 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 CHST11Q9NPF2 352 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 DEPPQ9NTK1 212 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 TXNL4BQ9NX01 149 aaKnown RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 COQ3Q9NZJ6 369 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 B4GALT7Q9UBV7 327 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 PRODH2Q9UF12 536 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 EXOGQ9Y2C4 368 aaKnown RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 NUP214P35658 2090 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 NCOA6Q14686 2063 aaPredicted RBP9.42□□□□□ -0.9
COL5A1-202ENST00000371820 PDZD2O15018 2839 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 PKDREJQ9NTG1 2253 aa9.42□□□□□ -0.9
COL5A1-202ENST00000371820 CSMD2Q7Z408 3487 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 TTC36A6NLP5 189 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 HRKO00198 91 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 CTDSP2O14595 271 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 ARHGEF9O43307 516 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 TPST2O60704 377 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 TMCC2O75069 709 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 WISP2O76076 250 aa9.41□□□□□ -0.9
COL5A1-202ENST00000371820 GLSO94925 669 aaPredicted RBP9.41□□□□□ -0.9
COL5A1-202ENST00000371820 KCNK2O95069 426 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms