RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 VHLLQ6RSH7 139 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 ZCCHC24Q8N2G6 241 aaKnown RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 MFSD8Q8NHS3 518 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 STK35Q8TDR2 534 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 FOXN4Q96NZ1 517 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 KCNK17Q96T54 332 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 SOX7Q9BT81 388 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 PIF1Q9H611 641 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 BCL2L10Q9HD36 194 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 SLC52A3Q9NQ40 469 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 CALML5Q9NZT1 146 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 CRNNQ9UBG3 495 aaPredicted RBP11.43□□□□□ -0.58
RPF1-201ENST00000370654 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
RPF1-201ENST00000370654 ARPC4-TTLL3A0A0A6YYG9 625 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 ZNF587BE7ETH6 402 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 PHF1O43189 567 aaPredicted RBP11.42□□□□□ -0.58
RPF1-201ENST00000370654 SEC14L2O76054 403 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 HPRP00739 348 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 IGLV1-44P01699 117 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 FAM157CP0CG43 387 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 BMP2P12643 396 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 HLA-DOBP13765 273 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 IGFBP5P24593 272 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 SERPINF1P36955 418 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
RPF1-201ENST00000370654 CHRNB3Q05901 458 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 GGTLC2Q14390 218 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 PAGE3Q5JUK9 113 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 KLHL24Q6TFL4 600 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 EPGNQ6UW88 154 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 MSANTD1Q6ZTZ1 278 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 NFKBIDQ8NI38 313 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 PROX1Q92786 737 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 EBF4Q9BQW3 602 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 LINC00470Q9BZP3 86 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 IKZF5Q9H5V7 419 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 RMND5AQ9H871 391 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 TMBIM4Q9HC24 238 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 CA10Q9NS85 328 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 ZNF232Q9UNY5 417 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 RASD1Q9Y272 281 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 USH1CQ9Y6N9 552 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 PMF1-BGLAPU3KQ54 211 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 STAB1Q9NY15 2570 aa11.42□□□□□ -0.58
RPF1-201ENST00000370654 A0A1B0GWA3 101 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 TMEM129A0AVI4 362 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 SLCO1B7G3V0H7 640 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 M0R082 166 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 ZNF500O60304 480 aaPredicted RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 TPST2O60704 377 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 FZD7O75084 574 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 AHSA1O95433 338 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 OR4A8P0C604 315 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 NR4A2P43354 598 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 SLC18A1P54219 525 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 CARTPTQ16568 116 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 C6orf89Q6UWU4 347 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 MIER2Q8N344 545 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 ZNF417Q8TAU3 575 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 MSI2Q96DH6 328 aaKnown RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 ZNF587Q96SQ5 575 aaPredicted RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 VRK1Q99986 396 aaPredicted RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 KATNB1Q9BVA0 655 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 NOX3Q9HBY0 568 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 GPR35Q9HC97 309 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 OBP2BQ9NPH6 170 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 IFT52Q9Y366 437 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 A0A096LPI6 279 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 MS4A18H0YCH9 400 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 TRAF3IP2O43734 574 aaPredicted RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 VAMP5O95183 116 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 IFNA2P01563 188 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 IGKV3-15P01624 115 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 GRPRP30550 384 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 THBS4P35443 961 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 PDLIM4P50479 330 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 UBE2NP61088 152 aaKnown RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 CEACAM16Q2WEN9 425 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 MS4A18Q3C1V0 323 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 KRTAP24-1Q3LI83 254 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 NHLRC1Q6VVB1 395 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 ABHD12BQ7Z5M8 362 aaPredicted RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 TMEM123Q8N131 208 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 BBS10Q8TAM1 723 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 MAGEE2Q8TD90 523 aaPredicted RBP11.41□□□□□ -0.58
RPF1-201ENST00000370654 OXGR1Q96P68 337 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 OR2M2Q96R28 347 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 PLK3Q9H4B4 646 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 SLCO1B3Q9NPD5 702 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 VAPAQ9P0L0 249 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 KLHL14Q9P2G3 628 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 CDC42EP3Q9UKI2 254 aa11.41□□□□□ -0.58
RPF1-201ENST00000370654 TRBV5-3A0A0A0MS03 114 aa11.4□□□□□ -0.59
RPF1-201ENST00000370654 LRP5LA4QPB2 252 aa11.4□□□□□ -0.59
RPF1-201ENST00000370654 LRRN3E7EW58 273 aa11.4□□□□□ -0.59
RPF1-201ENST00000370654 RPL36A-HNRNPH2H7BZ11 118 aa11.4□□□□□ -0.59
RPF1-201ENST00000370654 LMX1BO60663 402 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms