RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 FBLIM1Q8WUP2 373 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 NAA11Q9BSU3 229 aaPredicted RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 ENKD1Q9H0I2 346 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 DEFB127Q9H1M4 99 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 EXO5Q9H790 373 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 RNF6Q9Y252 685 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 TNRC6AQ8NDV7 1962 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 A0A0J9YW62 118 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 A0A1W2PNV4 684 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 IMPA2O14732 288 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 TNFSF11O14788 317 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 SURF4O15260 269 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 VAMP5O95183 116 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 IFNGP01579 166 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF708P17019 499 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 AHCYP23526 432 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 LHX2P50458 406 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CLDN20P56880 219 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CARD18P57730 90 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CTXN1P60606 82 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 RPS3AP61247 264 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 FOXK2Q01167 660 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CD47Q08722 323 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CTU2Q2VPK5 515 aaKnown RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 LINC00303Q3SY05 128 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 EMC4Q5J8M3 183 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 VASNQ6EMK4 673 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 LRRC75AQ8NAA5 344 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 ANKK1Q8NFD2 765 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 ADGRG7Q96K78 797 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 Q96MT0 163 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 ERMAPQ96PL5 475 aaPredicted RBP11.05□□□□□ -0.64
TUBE1-202ENST00000368662 KATNB1Q9BVA0 655 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 PRORYQ9H606 182 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 CMC2Q9NRP2 79 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 INIPQ9NRY2 104 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 RASSF1Q9NS23 344 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 SEC14L4Q9UDX3 406 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 LHX6Q9UPM6 363 aa11.05□□□□□ -0.64
TUBE1-202ENST00000368662 MAP1BP46821 2468 aaKnown RBP11.04□□□□□ -0.64
TUBE1-202ENST00000368662 MED12Q93074 2177 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 NPIPB13A6NJU9 1138 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 AQP7P3A6NL99 342 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 RIIAD1A6NNX1 92 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 NPIPB4C9JG80 1138 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 M0R3G1 203 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 AKR7A3O95154 331 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 PPP1R3DO95685 299 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 FAM87AP0C7U9 286 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 STARP49675 285 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 CHN2P52757 468 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 CXCR4P61073 352 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 CSNK2BP67870 215 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 H3F3AP84243 136 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 C19orf57Q0VDD7 668 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 PLEKHN1Q494U1 663 aaPredicted RBP11.04□□□□□ -0.64
TUBE1-202ENST00000368662 GXYLT1Q4G148 440 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 SLC25A30Q5SVS4 291 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 MEDAGQ5VYS4 303 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 GPR139Q6DWJ6 353 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 UGT2A3Q6UWM9 527 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 TRILQ7L0X0 811 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 PXKQ7Z7A4 578 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 UBQLNLQ8IYU4 475 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 TMEM163Q8TC26 289 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 RELTQ969Z4 430 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
TUBE1-202ENST00000368662 YTHDF1Q9BYJ9 559 aaKnown RBP11.04□□□□□ -0.64
TUBE1-202ENST00000368662 FN3KQ9H479 309 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 GRHPRQ9UBQ7 328 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 KLHL21Q9UJP4 597 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 RASD1Q9Y272 281 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 IER3IP1Q9Y5U9 82 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 ACACBO00763 2458 aa11.04□□□□□ -0.64
TUBE1-202ENST00000368662 LOC102725191A0A1B0GVB3 256 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 A0A1B0GVC2 190 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 A0A1W2PRG6 482 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 SNTNA6NMZ2 147 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TLX2O43763 284 aaPredicted RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TNFAIP8O95379 198 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TXNDC12O95881 172 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 F13BP05160 661 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ZNF3P17036 446 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 GABRB1P18505 474 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 ENPP1P22413 925 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 SDHAP31040 664 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 AGFG1P52594 562 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 CLDN18P56856 261 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 EFNB1P98172 346 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 CDK5R2Q13319 367 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TMEM225Q6GV28 225 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 IGFN1Q86VF2 1251 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 FAM26EQ8N5C1 309 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TMEM99Q8N816 258 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TCEANCQ8N8B7 351 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 OR10D3Q8NH80 312 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 HDAC2Q92769 488 aaKnown RBP11.03□□□□□ -0.64
TUBE1-202ENST00000368662 TAAR6Q96RI8 345 aa11.03□□□□□ -0.64
TUBE1-202ENST00000368662 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms