RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 NEUROG1Q92886 237 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 BOD1Q96IK1 185 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 OXGR1Q96P68 337 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF587Q96SQ5 575 aaPredicted RBP16.64■□□□□ 0.25
CKS1B-203ENST00000368439 PCDHAC1Q9H158 963 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 DLL4Q9NR61 685 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 GID8Q9NWU2 228 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 B3GALT5Q9Y2C3 310 aa16.64■□□□□ 0.25
CKS1B-203ENST00000368439 LOC102725191A0A1B0GVB3 256 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 A0A1W2PR80 420 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 CPSF4LA6NMK7 179 aaKnown RBP16.63■□□□□ 0.25
CKS1B-203ENST00000368439 MS4A18H0YCH9 400 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 AIM2O14862 343 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 CHP2O43745 196 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 PTNP21246 168 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 MPGP29372 298 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 SEC24CP53992 1094 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 SLC25A3Q00325 362 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 MS4A18Q3C1V0 323 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 ERICH5Q6P6B1 374 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 NHLRC1Q6VVB1 395 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 H1FNTQ75WM6 255 aaPredicted RBP16.63■□□□□ 0.25
CKS1B-203ENST00000368439 TREML1Q86YW5 311 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 KBTBD8Q8NFY9 601 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 OR52N5Q8NH56 324 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 VANGL1Q8TAA9 524 aaPredicted RBP16.63■□□□□ 0.25
CKS1B-203ENST00000368439 MOGAT1Q96PD6 335 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 SLC17A5Q9NRA2 495 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 CMTM6Q9NX76 183 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 SELENONQ9NZV5 590 aa16.63■□□□□ 0.25
CKS1B-203ENST00000368439 PLCE1Q9P212 2302 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 FAM220BPB1ANY3 271 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 SHISA9B4DS77 424 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 LRRN3E7EW58 273 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 CLOCKO15516 846 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 CCDC22O60826 627 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 SMPD2O60906 423 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 UPK3AO75631 287 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 HPRP00739 348 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 COX4I1P13073 169 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 CD99P14209 185 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 PAX1P15863 534 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 CBLP22681 906 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 GTF2E2P29084 291 aaKnown RBP16.62■□□□□ 0.25
CKS1B-203ENST00000368439 NKX6-1P78426 367 aaPredicted RBP16.62■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF672Q499Z4 452 aaPredicted RBP16.62■□□□□ 0.25
CKS1B-203ENST00000368439 C8orf82Q6P1X6 216 aaPredicted RBP16.62■□□□□ 0.25
CKS1B-203ENST00000368439 NIPAL3Q6P499 406 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 C17orf78Q8N4C9 275 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 RNF217Q8TC41 542 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 SLC26A7Q8TE54 656 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 ADAMTS16Q8TE57 1224 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 RASSF5Q8WWW0 418 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 EPYCQ99645 322 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF426Q9BUY5 554 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 LINC00470Q9BZP3 86 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 HEATR1Q9H583 2144 aaKnown RBP16.62■□□□□ 0.25
CKS1B-203ENST00000368439 GMPR2Q9P2T1 348 aaKnown RBP16.62■□□□□ 0.25
CKS1B-203ENST00000368439 RCE1Q9Y256 329 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 USF3Q68DE3 2245 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 MTORP42345 2549 aa16.62■□□□□ 0.25
CKS1B-203ENST00000368439 TRAF3IP2O43734 574 aaPredicted RBP16.61■□□□□ 0.25
CKS1B-203ENST00000368439 DANCRP0C864 163 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF43P17038 809 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 CLDN17P56750 224 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 MFSD13AQ14CX5 517 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 SPATA21Q7Z572 469 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 SLC15A3Q8IY34 581 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 SCAIQ8N9R8 606 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 ELAC2Q9BQ52 826 aaKnown RBP16.61■□□□□ 0.25
CKS1B-203ENST00000368439 PRSS27Q9BQR3 290 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 MYLK2Q9H1R3 596 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 CORINQ9Y5Q5 1042 aa16.61■□□□□ 0.25
CKS1B-203ENST00000368439 TRAPPC13A5PLN9 417 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 OR6C65A6NJZ3 312 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 ABCD4O14678 606 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 HLA-DOBP13765 273 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 TNFRSF1BP20333 461 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF83P51522 516 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 TGFBR3Q03167 851 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 SHEQ5VZ18 495 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 CARM1Q86X55 608 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 MICU2Q8IYU8 434 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 OR2T12Q8NG77 320 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 FBXW5Q969U6 566 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 ALKBH3Q96Q83 286 aaPredicted RBP16.6■□□□□ 0.25
CKS1B-203ENST00000368439 GSX2Q9BZM3 304 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 ZNF701Q9NV72 531 aaPredicted RBP16.6■□□□□ 0.25
CKS1B-203ENST00000368439 MRPL39Q9NYK5 338 aaKnown RBP16.6■□□□□ 0.25
CKS1B-203ENST00000368439 SLC7A7Q9UM01 511 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 SH3GLB1Q9Y371 365 aa16.6■□□□□ 0.25
CKS1B-203ENST00000368439 RPL36A-HNRNPH2H7BZ11 118 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 TMCC2O75069 709 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 SOD3P08294 240 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 DRD4P21917 467 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 CD40P25942 277 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 KDELR2P33947 212 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 PTH2RP49190 550 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 PGGHGQ32M88 737 aa16.59■□□□□ 0.25
CKS1B-203ENST00000368439 HIKESHIQ53FT3 197 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms