RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TEX35Q5T0J7 233 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 SAMD5Q5TGI4 173 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 OR56A1Q8NGH5 318 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 PMM1Q92871 262 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF837Q96EG3 531 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF75AQ96N20 296 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 CCT7Q99832 543 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 B3GNT2Q9NY97 397 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 OSGIN1Q9UJX0 560 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 MKLN1Q9UL63 735 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
VAMP4-202ENST00000367740 DSPPQ9NZW4 1301 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 SEC22BO75396 215 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 FOXH1O75593 365 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF432O94892 652 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 IMPDH1P20839 514 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 OR7A5Q15622 319 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 FAM189A2Q15884 450 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 NKPD1Q17RQ9 610 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 GKAP1Q5VSY0 366 aaPredicted RBP12.41□□□□□ -0.42
VAMP4-202ENST00000367740 USP51Q70EK9 711 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 CREG2Q8IUH2 290 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 EPHX4Q8IUS5 362 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
VAMP4-202ENST00000367740 ANKK1Q8NFD2 765 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 PSMA8Q8TAA3 256 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 TIMD4Q96H15 378 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 FCRL1Q96LA6 429 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 ERP44Q9BS26 406 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF350Q9GZX5 532 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 GSTO2Q9H4Y5 243 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 MID1IP1Q9NPA3 183 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 UBAP1Q9NZ09 502 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 SLC35A3Q9Y2D2 325 aa12.41□□□□□ -0.42
VAMP4-202ENST00000367740 IGHV3OR16-10A0A075B7F0 116 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 AP3D1O14617 1153 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 HLA-HP01893 362 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 GPIP06744 558 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 ZNF12P17014 697 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 TCP1P17987 556 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 PRPH2P23942 346 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 HTR3AP46098 478 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 IDH2P48735 452 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 POLR2HP52434 150 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 RPS26P62854 115 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 TEKQ02763 1124 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 PCGF3Q3KNV8 242 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 FIP1L1Q6UN15 594 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 PARP8Q8N3A8 854 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 BHLHE22Q8NFJ8 381 aaPredicted RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 ST7LQ8TDW4 575 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 RAB1CQ92928 201 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 L3HYPDHQ96EM0 354 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 METTL2AQ96IZ6 378 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 TSPAN32Q96QS1 320 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 GATA5Q9BWX5 397 aaPredicted RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 GPR35Q9HC97 309 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 HINT3Q9NQE9 182 aaKnown RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 RRAGDQ9NQL2 400 aaPredicted RBP12.4□□□□□ -0.42
VAMP4-202ENST00000367740 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 SEC14L4Q9UDX3 406 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 BAIAP2L1Q9UHR4 511 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 KLHL21Q9UJP4 597 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 RNF114Q9Y508 228 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 INSIG2Q9Y5U4 225 aa12.4□□□□□ -0.42
VAMP4-202ENST00000367740 STX11O75558 287 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 CLPXO76031 633 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 CLPTM1O96005 669 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 IGHMP01871 453 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 CRYBA1P05813 215 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TAC1P20366 129 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TACR3P29371 465 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 LOXL3P58215 753 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 GSG1Q2KHT4 349 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 AP1ARQ63HQ0 302 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TMEM225Q6GV28 225 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TMEM154Q6P9G4 183 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 CCDC36Q8IYA8 594 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 OR5AK3PQ8NH89 298 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 FBXO25Q8TCJ0 367 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 SFXN5Q8TD22 340 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 MRI1Q9BV20 369 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TCF7L1Q9HCS4 588 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TNFRSF12AQ9NP84 129 aa12.39□□□□□ -0.43
VAMP4-202ENST00000367740 EXOSC3Q9NQT5 275 aaKnown RBP12.39□□□□□ -0.43
VAMP4-202ENST00000367740 POLR3KQ9Y2Y1 108 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-202ENST00000367740 TET2Q6N021 2002 aaPredicted RBP12.38□□□□□ -0.43
VAMP4-202ENST00000367740 RYR2Q92736 4967 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 ISPDA4D126 451 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 CLDN24A6NM45 220 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 SRRM5B3KS81 715 aa12.38□□□□□ -0.43
VAMP4-202ENST00000367740 AK1P00568 194 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms