RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CSNK2BP67870 215 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 TUBA4AP68366 448 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 MVKQ03426 396 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 DBPQ10586 325 aaPredicted RBP8.53□□□□□ -1.04
VTA1-201ENST00000367621 MYBPHQ13203 477 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 SGCBQ16585 318 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 MS4A18Q3C1V0 323 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 SLC35F1Q5T1Q4 408 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 SLC6A19Q695T7 634 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 MAMDC2Q7Z304 686 aaPredicted RBP8.53□□□□□ -1.04
VTA1-201ENST00000367621 FAM122BQ7Z309 247 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 YRDCQ86U90 279 aaKnown RBP8.53□□□□□ -1.04
VTA1-201ENST00000367621 CD163Q86VB7 1156 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 SPARTQ8N0X7 666 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 C10orf53Q8N6V4 93 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 ATP6V1C2Q8NEY4 427 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 BBS1Q8NFJ9 593 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 OR52L1Q8NGH7 329 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 SLC25A36Q96CQ1 311 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 LRR1Q96L50 414 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 SLC38A2Q96QD8 506 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 TAPBPLQ9BX59 468 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 HINT3Q9NQE9 182 aaKnown RBP8.53□□□□□ -1.04
VTA1-201ENST00000367621 CLN6Q9NWW5 311 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 MRPL39Q9NYK5 338 aaKnown RBP8.53□□□□□ -1.04
VTA1-201ENST00000367621 BAIAP2Q9UQB8 552 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 RPH3AQ9Y2J0 694 aaPredicted RBP8.53□□□□□ -1.04
VTA1-201ENST00000367621 ADAM18Q9Y3Q7 739 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 CSAG2Q9Y5P2 127 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 IER3IP1Q9Y5U9 82 aa8.53□□□□□ -1.04
VTA1-201ENST00000367621 DPPA5A6NC42 116 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 CCDC182A6NF36 153 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF814B7Z6K7 855 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 FAM47E-STBD1D6RA91 191 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 PTGES3LE9PB15 166 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 H3BML4 177 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 BLOC1S5-TXNDC5H3BN57 136 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 M0R082 166 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 IMPA2O14732 288 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 IDH3BO43837 385 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 OR2T1O43869 369 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 FAM20BO75063 409 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 AHSA1O95433 338 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 MT-ND2P03891 347 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 HPNP05981 417 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 CD14P08571 375 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 APEHP13798 732 aaKnown RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 ATP6V1B1P15313 513 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 HIST1H1CP16403 213 aaKnown RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF17P17021 662 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 KLK2P20151 261 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 PCMT1P22061 227 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 SLC2A5P22732 501 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 IDUAP35475 653 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 CD97P48960 835 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 CLK1P49759 484 aaKnown RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 TNFSF10P50591 281 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 GFRA1P56159 465 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 CLDN15P56746 228 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ERVK-25P63136 954 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF91Q05481 1191 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZP4Q12836 540 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 SELENBP1Q13228 472 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ITGADQ13349 1161 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 IRF3Q14653 427 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF239Q16600 458 aaKnown RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 HYAL4Q2M3T9 481 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 TMEM176BQ3YBM2 270 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 ALG10Q5BKT4 473 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 MEDAGQ5VYS4 303 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 XAF1Q6GPH4 301 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 NANOGNBQ7Z5D8 188 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 CPOQ8IVL8 374 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 SPACA3Q8IXA5 215 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 EXD3Q8N9H8 876 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 NPEPL1Q8NDH3 523 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 FAM83FQ8NEG4 500 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF417Q8TAU3 575 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZPLD1Q8TCW7 415 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 SLC25A43Q8WUT9 341 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 IPCEF1Q8WWN9 437 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 DDIT4LQ96D03 193 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ERMAPQ96PL5 475 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 TSPAN32Q96QS1 320 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF587Q96SQ5 575 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 SMAD5Q99717 465 aaKnown RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 KATNB1Q9BVA0 655 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 NMNAT2Q9BZQ4 307 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 FN3KQ9H479 309 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 TMEM185BQ9H7F4 350 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 ZNF703Q9H7S9 590 aaPredicted RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 MED20Q9H944 212 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 KLHL1Q9NR64 748 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 SERINC1Q9NRX5 453 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 MRPS18AQ9NVS2 196 aaKnown RBP8.52□□□□□ -1.05
VTA1-201ENST00000367621 DKKL1Q9UK85 242 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 TPRKBQ9Y3C4 175 aa8.52□□□□□ -1.05
VTA1-201ENST00000367621 A0A1W2PNR3 127 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms