RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CASKO14936 926 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 MRPL33O75394 65 aaKnown RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 HPRP00739 348 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 C8BP07358 591 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 NQO1P15559 274 aaKnown RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 CDH2P19022 906 aaPredicted RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 MSX2P35548 267 aaPredicted RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 SELENOPP49908 381 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 MAP2K6P52564 334 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 PIN1Q13526 163 aaPredicted RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 PDK3Q15120 406 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 SFRP5Q5T4F7 317 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 FAM69AQ5T7M9 428 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 TSPO2Q5TGU0 170 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 TMEM225Q6GV28 225 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 NIPAL3Q6P499 406 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 AAED1Q7RTV5 226 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 MEX3DQ86XN8 651 aaKnown RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 NKAIN4Q8IVV8 208 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 FITM2Q8N6M3 262 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 ZIC4Q8N9L1 334 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 TMEM255BQ8WV15 326 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 SLC41A3Q96GZ6 507 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 HSH2DQ96JZ2 352 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 HOPXQ9BPY8 73 aaPredicted RBP12.93□□□□□ -0.34
SF3B5-201ENST00000367569 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 SPAG4Q9NPE6 437 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 SLC7A10Q9NS82 523 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 FAM53CQ9NYF3 392 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 ABCD2Q9UBJ2 740 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 BAG5Q9UL15 447 aa12.93□□□□□ -0.34
SF3B5-201ENST00000367569 RAI1Q7Z5J4 1906 aaPredicted RBP12.92□□□□□ -0.34
SF3B5-201ENST00000367569 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.92□□□□□ -0.34
SF3B5-201ENST00000367569 GPR171O14626 319 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 FMO6PO60774 539 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 FAM107AO95990 144 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 ITGA5P08648 1049 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 HLA-DOBP13765 273 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 PSMB1P20618 241 aaKnown RBP12.92□□□□□ -0.34
SF3B5-201ENST00000367569 CRYGSP22914 178 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 UGT2B15P54855 530 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 CLDN17P56750 224 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 TAB1Q15750 504 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 GKAP1Q5VSY0 366 aaPredicted RBP12.92□□□□□ -0.34
SF3B5-201ENST00000367569 CARD17Q5XLA6 110 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 Q6ZT83 130 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 EPHX4Q8IUS5 362 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 LRRC17Q8N6Y2 441 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 FAM86B1Q8N7N1 296 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 CCDC197Q8NCU1 140 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 RASSF5Q8WWW0 418 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 SMR3AQ99954 134 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 PRSS27Q9BQR3 290 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 B3GAT1Q9P2W7 334 aa12.92□□□□□ -0.34
SF3B5-201ENST00000367569 NSD1Q96L73 2696 aaPredicted RBP12.92□□□□□ -0.34
SF3B5-201ENST00000367569 ROS1P08922 2347 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 C11orf98E9PRG8 122 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 CH25HO95992 272 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 PLAUP00749 431 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 IFNA14P01570 189 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 COX5AP20674 150 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 LSM11P83369 360 aaKnown RBP eCLIP12.91□□□□□ -0.34
SF3B5-201ENST00000367569 POU3F1Q03052 451 aaPredicted RBP12.91□□□□□ -0.34
SF3B5-201ENST00000367569 ITGADQ13349 1161 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 SWT1Q5T5J6 900 aaKnown RBP12.91□□□□□ -0.34
SF3B5-201ENST00000367569 FBXW9Q5XUX1 488 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 TTC33Q6PID6 262 aaPredicted RBP12.91□□□□□ -0.34
SF3B5-201ENST00000367569 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 OR52N5Q8NH56 324 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 PLPPR2Q96GM1 343 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 ASPNQ9BXN1 380 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 UBTD1Q9HAC8 227 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 BEX4Q9NWD9 120 aaPredicted RBP12.91□□□□□ -0.34
SF3B5-201ENST00000367569 MED29Q9NX70 200 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 UPB1Q9UBR1 384 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 GPR52Q9Y2T5 361 aa12.91□□□□□ -0.34
SF3B5-201ENST00000367569 CIB4A0PJX0 185 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 SEC14L2O76054 403 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 UMPSP11172 480 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 GGT1P19440 569 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 FUT1P19526 365 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 LOXP28300 417 aaPredicted RBP12.9□□□□□ -0.34
SF3B5-201ENST00000367569 PCYT1AP49585 367 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 SELENOWP63302 87 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 NKX6-1P78426 367 aaPredicted RBP12.9□□□□□ -0.34
SF3B5-201ENST00000367569 PMS2P3Q13401 168 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 C1DQ13901 141 aaKnown RBP12.9□□□□□ -0.34
SF3B5-201ENST00000367569 Q71RC1 249 aaPredicted RBP12.9□□□□□ -0.34
SF3B5-201ENST00000367569 DEFB107AQ8IZN7 70 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 ZNF433Q8N7K0 673 aaPredicted RBP12.9□□□□□ -0.34
SF3B5-201ENST00000367569 STEAP2Q8NFT2 490 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 TMEM45BQ96B21 275 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 C18orf12Q96KH6 178 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 EPYCQ99645 322 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 TMEM43Q9BTV4 400 aa12.9□□□□□ -0.34
SF3B5-201ENST00000367569 EMC6Q9BV81 110 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms