RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 TSEN54Q7Z6J9 526 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 CBARPQ8N350 705 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF417Q8TAU3 575 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ZFP90Q8TF47 636 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 SLAMF9Q96A28 289 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ISG20Q96AZ6 181 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 BIRC7Q96CA5 298 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF587Q96SQ5 575 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 KATNB1Q9BVA0 655 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 POLDIP3Q9BY77 421 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 TBX21Q9UL17 535 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 MMACHCQ9Y4U1 282 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 SLC22A7Q9Y694 548 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 TIAM2Q8IVF5 1701 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 OR6C68A6NDL8 312 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 LYRM1O43325 122 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 STC2O76061 302 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 F7P08709 466 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 HOXD8P13378 290 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 EFNA1P20827 205 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 EPHA1P21709 976 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 FPR3P25089 353 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ARF6P62330 175 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ST3GAL3Q11203 375 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 FAM217AQ8IXS0 508 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 HRASLS5Q96KN8 279 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 SLC6A18Q96N87 628 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 OR5B2Q96R09 309 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 MGLLQ99685 303 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 LIN7CQ9NUP9 197 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 DNMT3BQ9UBC3 853 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 ERRFI1Q9UJM3 462 aaPredicted RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 F5H5P2 479 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 F6UZH7 168 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 RGS11O94810 467 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 CD3EP07766 207 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 DBHP09172 617 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 UBBP0CG47 229 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 UBCP0CG48 685 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 XCR1P46094 333 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 LSSP48449 732 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 MLLT10P55197 1068 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 RBM11P57052 281 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 IHHQ14623 411 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 THEM4Q5T1C6 240 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 FCRLBQ6BAA4 426 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 THEM6Q8WUY1 208 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 URM1Q9BTM9 101 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 OR51I1Q9H343 314 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 UBQLN4Q9NRR5 601 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 FAM120CQ9NX05 1096 aaKnown RBP8.04□□□□□ -1.12
SYNE1-206ENST00000367253 CLEC5AQ9NY25 188 aa8.04□□□□□ -1.12
SYNE1-206ENST00000367253 A0A1W2PS29 197 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 SERPINE3A8MV23 424 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ANGPTL7O43827 346 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 EGFP01133 1207 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR10J4P0C629 311 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CHRNA4P43681 627 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 RBP2P50120 134 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ART1P52961 327 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GPX6P59796 221 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 KCNAB2Q13303 367 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HTR4Q13639 388 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 IL17AQ16552 155 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 LIPKQ5VXJ0 399 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ADGRF3Q8IZF5 1079 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 KLHDC9Q8NEP7 349 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GRHL3Q8TE85 626 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PGAP3Q96FM1 320 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 REEP6Q96HR9 211 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CPPED1Q9BRF8 314 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ATG5Q9H1Y0 275 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GHITMQ9H3K2 345 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 MYADML2A6NDP7 307 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HSPB2A8KAH6 182 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 LINC01387J3KSC0 135 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 M0QZK8 103 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 GGCTO75223 188 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CH25HO95992 272 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ADORA3P0DMS8 318 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CCR7P32248 378 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HOXA1P49639 335 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PPIAP62937 165 aaKnown RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HSPB2Q16082 182 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HIST2H3AQ71DI3 136 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF765Q7L2R6 523 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 TGIF2LXQ8IUE1 241 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 OR4K1Q8NGD4 311 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 TSGA13Q96PP4 275 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 PECRQ9BY49 303 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ZCCHC4Q9H5U6 513 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 HAO2Q9NYQ3 351 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 THAP10Q9P2Z0 257 aaPredicted RBP8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CASZ1Q86V15 1759 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 ZNF860A6NHJ4 632 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CCL21O00585 134 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 WNT7AO00755 349 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 CREG1O75629 220 aa8.03□□□□□ -1.12
SYNE1-206ENST00000367253 SLC22A5O76082 557 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms