RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 USP36Q9P275 1121 aaKnown RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3DA0A087WVF3 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3IA0A087WXS9 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3EA0A087X179 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3KA0A087X1G2 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TRAV20A0A0B4J274 112 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3FA6NER0 549 aaPredicted RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3LB9A6J9 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 ITGA10O75578 1167 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3HP0C7X1 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 RIPPLY1Q0D2K3 151 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 DUSP5Q16690 384 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 DECR1Q16698 335 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3GQ6DHY5 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 OR7E24Q6IFN5 339 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3CQ6IPX1 549 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TSSK4Q6SA08 328 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 WDR88Q6ZMY6 472 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D3Q8IZP1 549 aaPredicted RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 EXO5Q9H790 373 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 PURGQ9UJV8 347 aaKnown RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TRIOBPQ9H2D6 2365 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 LRRC72A6NJI9 287 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 PPP1R3DO95685 299 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 CEACAM5P06731 702 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 LUMP51884 338 aaPredicted RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 FOXK2Q01167 660 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 DUSP19Q8WTR2 217 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 LCN9Q8WX39 176 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 PEX11GQ96HA9 241 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 MNTQ99583 582 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 TIMP4Q99727 224 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 RPP25Q9BUL9 199 aaKnown RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 BCL2L10Q9HD36 194 aa18.04■□□□□ 0.48
TRIM58-201ENST00000366481 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.04■□□□□ 0.48
TRIM58-201ENST00000366481 POM121BA6NF01 834 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 RPP14O95059 124 aaKnown RBP18.03■□□□□ 0.48
TRIM58-201ENST00000366481 PDGFRLQ15198 375 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 FRRS1Q6ZNA5 592 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 NAXDQ8IW45 347 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 DNAAF1Q8NEP3 725 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 NANPQ8TBE9 248 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 NSMAFQ92636 917 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 PGLYRP3Q96LB9 341 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 BIN3Q9NQY0 253 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 PHPT1Q9NRX4 125 aaPredicted RBP18.03■□□□□ 0.48
TRIM58-201ENST00000366481 STARD5Q9NSY2 213 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 ASF1BQ9NVP2 202 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 TBC1D29Q9UFV1 150 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 CES1P1Q9UKY3 287 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 KANTRA0A1W2PQU2 76 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 ZNF879B4DU55 563 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 SELENOFO60613 162 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 ZGLP1P0C6A0 271 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 PVRP15151 417 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 CBFBQ13951 182 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 TAF13Q15543 124 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 LINC00469Q8N7U9 141 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 OR56A1Q8NGH5 318 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 TSACCQ96A04 125 aaPredicted RBP18.03■□□□□ 0.48
TRIM58-201ENST00000366481 GIMAP5Q96F15 307 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 PLA2G2FQ9BZM2 168 aa18.03■□□□□ 0.48
TRIM58-201ENST00000366481 LINC01553A4QN01 128 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 FAM25EA8MYX2 175 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 SGCEO43556 437 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 GSTZ1O43708 216 aaPredicted RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 TBX19O60806 448 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 HPP00738 406 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 CPN1P15169 458 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 FAUP35544 74 aaKnown RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 UBE2IP63279 158 aaKnown RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 ZNF85Q03923 595 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 YOD1Q5VVQ6 348 aaPredicted RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 RAB12Q6IQ22 244 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 RAB11FIP2Q7L804 512 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 SPAG16Q8N0X2 631 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 OR6K6Q8NGW6 343 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 HAVCR2Q8TDQ0 301 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 SMARCD2Q92925 531 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 OR2M5A3KFT3 312 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 RBBP9O75884 186 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 ZNF3P17036 446 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 SRMP19623 302 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 CDK2P24941 298 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 MEOX2P50222 304 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 RAB13P51153 203 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 EXOSC7Q15024 291 aaKnown RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 THSD4Q6ZMP0 1018 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 ZNF836Q6ZNA1 936 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 PXKQ7Z7A4 578 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 ZNF761Q86XN6 746 aaPredicted RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 CCDC36Q8IYA8 594 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 OR2AK2Q8NG84 335 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 OR5T3Q8NGG3 340 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 PNPLA2Q96AD5 504 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 CMSS1Q9BQ75 279 aaKnown RBP18.02■□□□□ 0.48
TRIM58-201ENST00000366481 GPR174Q9BXC1 333 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 CFHR5Q9BXR6 569 aa18.02■□□□□ 0.48
TRIM58-201ENST00000366481 NRIP3Q9NQ35 241 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms