RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 F6UZH7 168 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GAPDHSO14556 408 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GOSR2O14653 212 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 PRAF2O60831 178 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 MT-ATP6P00846 226 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 PROX2Q3B8N5 592 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 TBRG1Q3YBR2 411 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GGTA1PQ4G0N0 100 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 FAM69AQ5T7M9 428 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 METTL11BQ5VVY1 283 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 RPL22L1Q6P5R6 122 aaKnown RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 FAM109AQ8N4B1 249 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GDPD1Q8N9F7 314 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 TMEM185AQ8NFB2 350 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 ABHD11Q8NFV4 315 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 FBXO27Q8NI29 283 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 KCNG3Q8TAE7 436 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 DDX31Q9H8H2 851 aaKnown RBP10.15□□□□□ -0.78
CLIP1-203ENST00000361654 LYRM4Q9HD34 91 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 GNG13Q9P2W3 67 aa10.15□□□□□ -0.78
CLIP1-203ENST00000361654 CDHR4A6H8M9 788 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 OR6C76A6NM76 312 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 ARNTLO00327 626 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 CSO75390 466 aaKnown RBP10.15□□□□□ -0.79
CLIP1-203ENST00000361654 HOXD12P35452 270 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 ARR3P36575 388 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 SRP14P37108 136 aaKnown RBP10.15□□□□□ -0.79
CLIP1-203ENST00000361654 AQP2P41181 271 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 CXADRP78310 365 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 PLA2G7Q13093 441 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 CAMK2BQ13554 666 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 OR8G1Q15617 311 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 NDUFAF7Q7L592 441 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 GINS3Q9BRX5 216 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF696Q9H7X3 374 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 YARS2Q9Y2Z4 477 aaKnown RBP10.15□□□□□ -0.79
CLIP1-203ENST00000361654 OR5H15A6NDH6 313 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 OR5H14A6NHG9 310 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 OR5H1A6NKK0 313 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 GRPP07492 148 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 EDN3P14138 238 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 ANXA7P20073 488 aaKnown RBP10.15□□□□□ -0.79
CLIP1-203ENST00000361654 TRHRP34981 398 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-203ENST00000361654 P2RX1P51575 399 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF77Q15935 545 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF789Q5FWF6 425 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 GRINAQ7Z429 371 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 CMTM4Q8IZR5 234 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 OR1E3Q8WZA6 343 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 TREX1Q9NSU2 369 aa10.15□□□□□ -0.79
CLIP1-203ENST00000361654 TRAV17A0A0B4J275 112 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM212A6NML5 194 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 STMND1H3BQB6 276 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SSX4O60224 188 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TGM4P49221 684 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TAS2R19P59542 299 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 HACD4Q5VWC8 232 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PODNL1Q6PEZ8 512 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 FAM111BQ6SJ93 734 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM207Q6UWW9 146 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PDZD9Q8IXQ8 264 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 NANPQ8TBE9 248 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 STK35Q8TDR2 534 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 KATNB1Q9BVA0 655 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SGPP1Q9BX95 441 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SLC25A18Q9H1K4 315 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 NPFFR2Q9Y5X5 522 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 BCKDHBP21953 392 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 EDDM3AQ14507 147 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 HABP2Q14520 560 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SYPL1Q16563 259 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 RSPO2Q6UXX9 243 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SPARTQ8N0X7 666 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 OR7G2Q8NG99 324 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 CMTM2Q8TAZ6 248 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM163Q8TC26 289 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 HRASLS5Q96KN8 279 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 BIRC8Q96P09 236 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 DHRS4Q9BTZ2 278 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 FAM234AQ9H0X4 552 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM181Q9P2C4 612 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 EBF1Q9UH73 591 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PIK3C2AO00443 1686 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 A0A0U1RQK1 487 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SLC5A10A0PJK1 596 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 IDSB3KWA1 339 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 BCL6P41182 706 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PGGT1BP53609 377 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 OR2A2Q6IF42 318 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 H1FNTQ75WM6 255 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-203ENST00000361654 HAS2Q92819 552 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 C4orf36Q96KX1 117 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 FOXN4Q96NZ1 517 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SLC6A17Q9H1V8 727 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF281Q9Y2X9 895 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 DOK2O60496 412 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 TOXO94900 526 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 KEAP1Q14145 624 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 RAB6CQ53S08 254 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PLAG1Q6DJT9 500 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms