RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 FOXN4Q96NZ1 517 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 SLC25A21Q9BQT8 299 aaPredicted RBP12.93□□□□□ -0.34
SMC5-201ENST00000361138 IFT22Q9H7X7 185 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 PTGES2Q9H7Z7 377 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 SEC14L5O43304 696 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 B3GALNT1O75752 331 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 CBR1P16152 277 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 CD53P19397 219 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 HOXA9P31269 272 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 MCCD1P59942 119 aaPredicted RBP12.93□□□□□ -0.34
SMC5-201ENST00000361138 GKN2Q86XP6 184 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 MSRB3Q8IXL7 192 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 SLC43A2Q8N370 569 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 NLGN4YQ8NFZ3 816 aaPredicted RBP12.93□□□□□ -0.34
SMC5-201ENST00000361138 OR5T1Q8NG75 326 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 SLC41A2Q96JW4 573 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 PLEKHJ1Q9NW61 149 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 NDRG3Q9UGV2 375 aa12.93□□□□□ -0.34
SMC5-201ENST00000361138 UPK1AO00322 258 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 MAGEB1P43366 347 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 POU3F4P49335 361 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 TNFRSF17Q02223 184 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 C12orf73Q69YU5 71 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 NIPAL3Q6P499 406 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 TECPR1Q7Z6L1 1165 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 TCEAL8Q8IYN2 117 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 OR52H1Q8NGJ2 320 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 TMEM106AQ96A25 262 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 SLCO5A1Q9H2Y9 848 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF225Q9UK10 706 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 NPIPA2E9PIF3 369 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 NPIPA3F8WFD2 350 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 BPNT1O95861 308 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 PGFP49763 221 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 UBE2KP61086 200 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 FAM209AQ5JX71 171 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 GPR139Q6DWJ6 353 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 CMIPQ8IY22 773 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 OR10R2Q8NGX6 335 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 FAM71F1Q96KD3 344 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 FTSJ1Q9UET6 329 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 DKKL1Q9UK85 242 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ICKQ9UPZ9 632 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 RHBDD3Q9Y3P4 386 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 HTR3BO95264 441 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZDHHC11BP0C7U3 371 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 CLDN2P57739 230 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF750Q32MQ0 723 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 CYHR1Q6ZMK1 362 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 DPY19L2P2Q6ZN68 376 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 BBS1Q8NFJ9 593 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 PPP4R1LQ9P1A2 415 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 FBXL4Q9UKA2 621 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 A0A087WUU8 490 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF705FA8MVS1 300 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 PLPP1O14494 284 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF705DP0CH99 300 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 ZNF705BP0CI00 300 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 TMEM225BP0DP42 221 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 MECP2P51608 486 aaKnown RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 TAS2R46P59540 309 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 CAMK2DQ13557 499 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 CMTM4Q8IZR5 234 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 DAZLQ92904 295 aaKnown RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 MIB2Q96AX9 1013 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 FAM3DQ96BQ1 224 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 HHIPL1Q96JK4 782 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 LINC00597Q9H2U6 94 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 TCEAL2Q9H3H9 227 aaPredicted RBP12.92□□□□□ -0.34
SMC5-201ENST00000361138 WDR76Q9H967 626 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 EHFQ9NZC4 300 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 WASF3Q9UPY6 502 aa12.92□□□□□ -0.34
SMC5-201ENST00000361138 PUS1Q9Y606 427 aaKnown RBP eCLIP12.92□□□□□ -0.34
SMC5-201ENST00000361138 MMP15P51511 669 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 PRDX1Q06830 199 aaKnown RBP12.91□□□□□ -0.34
SMC5-201ENST00000361138 PRELID3BQ9Y3B1 194 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 INSL6Q9Y581 213 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 ANKRD12Q6UB98 2062 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 VSTM2BA6NLU5 285 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 SLC16A7O60669 478 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 HLA-FP30511 346 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 LIM2P55344 173 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 ZNF620Q6ZNG0 422 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 LMX1AQ8TE12 382 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 R3HDMLQ9H3Y0 253 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 AUNIPQ9H7T9 357 aa12.91□□□□□ -0.34
SMC5-201ENST00000361138 ISG20L2Q9H9L3 353 aaKnown RBP12.91□□□□□ -0.34
SMC5-201ENST00000361138 HINT3Q9NQE9 182 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms