RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 PDCD11Q14690 1871 aaKnown RBP6.47□□□□□ -1.37
RAB5B-201ENST00000360299 TMED7-TICAM2A0A0A6YYA0 188 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 TEX51A0A1B0GUA7 166 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 KANTRA0A1W2PQU2 76 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 GGT3PA6NGU5 568 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 SSTR4P31391 388 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 RBMXP38159 391 aaKnown RBP6.47□□□□□ -1.37
RAB5B-201ENST00000360299 APOBEC1P41238 236 aaKnown RBP6.47□□□□□ -1.37
RAB5B-201ENST00000360299 PITPNBP48739 271 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 MAP2K6P52564 334 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 MZT1Q08AG7 82 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 CHRFAM7AQ494W8 412 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 TP53I3Q53FA7 332 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 FAM69AQ5T7M9 428 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 RAB12Q6IQ22 244 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 PGBD2Q6P3X8 592 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 ABI3BPQ7Z7G0 1075 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 CA13Q8N1Q1 262 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 OR52N1Q8NH53 320 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 AKAP1Q92667 903 aaKnown RBP eCLIP6.47□□□□□ -1.37
RAB5B-201ENST00000360299 NINJ1Q92982 152 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 TMIGD2Q96BF3 282 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 ZNF764Q96H86 408 aaPredicted RBP6.47□□□□□ -1.37
RAB5B-201ENST00000360299 PIGQQ9BRB3 760 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 PLCXD1Q9NUJ7 323 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 ZNF69Q9UC07 566 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 KLK13Q9UKR3 277 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 TBC1D24Q9ULP9 559 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 MGAT4AQ9UM21 535 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 TMED7Q9Y3B3 224 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 EMC9Q9Y3B6 208 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 A3GALT2U3KPV4 340 aa6.47□□□□□ -1.37
RAB5B-201ENST00000360299 CDHR4A6H8M9 788 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 OR6C70A6NIJ9 312 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 TP53P04637 393 aaPredicted RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PIPP12273 146 aaPredicted RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 FOLR1P15328 257 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 C21orf33P30042 268 aaPredicted RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 GRPRP30550 384 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PRSS3P35030 304 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PRKXP51817 358 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 AP2S1P53680 142 aaPredicted RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PRKCDQ05655 676 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 DUSP7Q16829 419 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 RNASE10Q5GAN6 216 aaKnown RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 GALNT16Q8N428 558 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 OR13C2Q8NGS9 318 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 KATNB1Q9BVA0 655 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 ENKD1Q9H0I2 346 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 ACER3Q9NUN7 267 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PCOLCE2Q9UKZ9 415 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 B3GNT3Q9Y2A9 372 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 CABIN1Q9Y6J0 2220 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 SLC43A1O75387 559 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PAPLNO95428 1278 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 HRGP04196 525 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 CSN2P05814 226 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 RAB40ALP0C0E4 278 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 HOXB9P17482 250 aaPredicted RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 P2RX1P51575 399 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 EFNA3P52797 238 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 PSMA6P60900 246 aaKnown RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 AIMP2Q13155 320 aaKnown RBP6.46□□□□□ -1.37
RAB5B-201ENST00000360299 OR5L1Q8NGL2 311 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 RAB40AQ8WXH6 277 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 SLC35A4Q96G79 324 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 TNFRSF13CQ96RJ3 184 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 CACNG6Q9BXT2 260 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 LHX9Q9NQ69 397 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 NUDT15Q9NV35 164 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 FBXL4Q9UKA2 621 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 ZNF281Q9Y2X9 895 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 SPEF1Q9Y4P9 236 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 NPFFR2Q9Y5X5 522 aa6.46□□□□□ -1.37
RAB5B-201ENST00000360299 SCN5AQ14524 2016 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 KCNE1BA0A087WTH5 132 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 A0A0A6YYD5 115 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 PRAMEF25A6NGN4 478 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 FGF17O60258 216 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 OR7A10O76100 309 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 VAMP5O95183 116 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 MAS1P04201 325 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 MSL3P1P0C860 447 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 RAB3AP20336 220 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 SLC1A3P43003 542 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 C21orf58P58505 322 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 POU3F1Q03052 451 aaPredicted RBP6.46□□□□□ -1.38
RAB5B-201ENST00000360299 SCRN3Q0VDG4 424 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 NTRK2Q16620 822 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 TRMT12Q53H54 448 aaKnown RBP6.46□□□□□ -1.38
RAB5B-201ENST00000360299 ZNF385BQ569K4 471 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 SYT6Q5T7P8 510 aaPredicted RBP6.46□□□□□ -1.38
RAB5B-201ENST00000360299 ZNF836Q6ZNA1 936 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 FAM26EQ8N5C1 309 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 OR5J2Q8NH18 312 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 TRMT10AQ8TBZ6 339 aaKnown RBP6.46□□□□□ -1.38
RAB5B-201ENST00000360299 EID2BQ96D98 161 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 C4orf36Q96KX1 117 aa6.46□□□□□ -1.38
RAB5B-201ENST00000360299 RANBP3Q9H6Z4 567 aaPredicted RBP6.46□□□□□ -1.38
RAB5B-201ENST00000360299 EGLN3Q9H6Z9 239 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms