RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 HRH3Q9Y5N1 445 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM269A0A1B0GVZ9 245 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 UMAD1C9J7I0 102 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 POU3F2P20265 443 aaPredicted RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RABIFP47224 123 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OR8G2PQ6IF36 304 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 C17orf105B2RV13 164 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 GM2AP17900 193 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 RAB1AP62820 205 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 GNB4Q9HAV0 340 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 B3GAT1Q9P2W7 334 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OR52A1Q9UKL2 312 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 WNT6Q9Y6F9 365 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 MN1Q10571 1320 aaPredicted RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 G3V3Q6 166 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 LAMP1P11279 417 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 FUT1P19526 365 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 NLGN4XQ8N0W4 816 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TRIB1Q96RU8 372 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 DDX31Q9H8H2 851 aaKnown RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SUSD5O60279 629 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 PPP1R11O60927 126 aaPredicted RBP8.68□□□□□ -1.02
VPS13A-203ENST00000360280 ENPP1P22413 925 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM183BQ1AE95 376 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 SFXN4Q6P4A7 337 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM135Q86UB9 458 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 OR5B3Q8NH48 314 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 DUSP19Q8WTR2 217 aa8.68□□□□□ -1.02
VPS13A-203ENST00000360280 MBTPS1Q14703 1052 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PGGHGQ32M88 737 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 Q499Y3 187 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CHADLQ6NUI6 762 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ADGRF3Q8IZF5 1079 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 BPIFCQ8NFQ6 507 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 HEXAP06865 529 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SMIM17P0DL12 118 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM11P17152 192 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CASP7P55210 303 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 MFSD6LQ8IWD5 586 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PLEKHF2Q9H8W4 249 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 GKN1Q9NS71 199 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ADAM29Q9UKF5 820 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 NME2P22392 152 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 BIDP55957 195 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ADGRG5Q8IZF4 528 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR10J5Q8NHC4 309 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PHF1O43189 567 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR7C1O76099 320 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 MTNR1BP49286 362 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CDCA2Q69YH5 1023 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PDZD3Q86UT5 571 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ATF6BQ99941 703 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR52D1Q9H346 318 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 IER3IP1Q9Y5U9 82 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SIX6O95475 246 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 GYPBP06028 91 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 NAGAP17050 411 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 WDR88Q6ZMY6 472 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ZFYVE21Q9BQ24 234 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ZNF443Q9Y2A4 671 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ENSAO43768 121 aaKnown RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 DUSP1P28562 367 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 HMGCLP35914 325 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PSMB10P40306 273 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 HENMT1Q5T8I9 393 aaKnown RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 DHRS9Q9BPW9 319 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 HEYLQ9NQ87 328 aaPredicted RBP8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TRAPPC2LQ9UL33 140 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SCML1Q9UN30 329 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 H7BYZ3 331 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CDKN2DP55273 166 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SLC22A24Q8N4F4 322 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM43Q9BTV4 400 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR51I2Q9H344 312 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 FAM171A2A8MVW0 826 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SPINT2O43291 252 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SULT1C4O75897 302 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TACR1P25103 407 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PRICKLE2Q7Z3G6 844 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 OR1J2Q8NGS2 313 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PIGCQ92535 297 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 PEBP4Q96S96 227 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 MOKQ9UQ07 419 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 SCN11AQ9UI33 1791 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 LGALS8O00214 317 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 GPR32O75388 356 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 FGF4P08620 206 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 HHEXQ03014 270 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 CDHR3Q6ZTQ4 885 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 RNF175Q8N4F7 328 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 ADIPOR1Q96A54 375 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 GDNFP39905 211 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 C5orf46Q6UWT4 87 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 Q6ZVL8 140 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 UMODL1-AS1Q8N2C9 162 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 TMEM130Q8N3G9 435 aa8.67□□□□□ -1.02
VPS13A-203ENST00000360280 HSD17B11Q8NBQ5 300 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms