RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 ZIC5Q96T25 663 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 STEAP1Q9UHE8 339 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 KIAA2026Q5HYC2 2103 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 NME1P15531 152 aaKnown RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 HOXA9P31269 272 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 RAB28P51157 221 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 CCL23P55773 120 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TRA2BP62995 288 aaKnown RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FXNQ16595 210 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM244Q5VVB8 128 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ADAMTS18Q8TE60 1221 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 DOK1Q99704 481 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 LRP5LA4QPB2 252 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SNRPGP15A8MWD9 76 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SLC2A1P11166 492 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TACR3P29371 465 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TM4SF1P30408 202 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 CCR7P32248 378 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FABP6P51161 128 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 BAMBIQ13145 260 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ADGRE4PQ86SQ3 457 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 NKAIN3Q8N8D7 197 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 NEIL2Q969S2 332 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF75AQ96N20 296 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM38AQ9H6F2 299 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FAM171A2A8MVW0 826 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 CYB5BO43169 146 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FRS3O43559 492 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 RNF4P78317 190 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ACSM1Q08AH1 577 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FUNDC1Q8IVP5 155 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FAM185AQ8N0U4 392 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 AMBRA1Q9C0C7 1298 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 RNF167Q9H6Y7 350 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 IL26Q9NPH9 171 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SERTAD4Q9NUC0 356 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FBXL12Q9NXK8 326 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 COCHO43405 550 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 DDNO94850 711 aaPredicted RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 NNATQ16517 81 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF239Q16600 458 aaKnown RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SYT14P1Q58G82 188 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SCAMP4Q969E2 229 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SENP5Q96HI0 755 aaPredicted RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ACTL6BO94805 426 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 HPNP05981 417 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ADIRFQ15847 76 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 RDH10Q8IZV5 341 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SDSLQ96GA7 329 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 PDLIM5Q96HC4 596 aaKnown RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF251Q9BRH9 671 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 PTPRFP10586 1907 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 A0A1W2PPV4 95 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SMIM6P0DI80 62 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 G0S2P27469 103 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 EMP2P54851 167 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 F2RL1P55085 397 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FOXK1P85037 733 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 GPR17Q13304 367 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 VSX1Q9NZR4 365 aaPredicted RBP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 KCNK6Q9Y257 313 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 MTMR11A4FU01 709 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ACOD1A6NK06 481 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 F3P13726 295 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 OMGP23515 440 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 FKBP1BP68106 108 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 COX15Q7KZN9 410 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 TP53INP2Q8IXH6 220 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 AKR7LQ8NHP1 331 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 SGK3Q96BR1 496 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 ZCCHC4Q9H5U6 513 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 CWH43Q9H720 699 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 CERS4Q9HA82 394 aa8.17□□□□□ -1.1
COL6A6-201ENST00000358511 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.17□□□□□ -1.1
COL6A6-201ENST00000358511 A0A0U1RQF3 1178 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CHEK1O14757 476 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 PIM1P11309 404 aaPredicted RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RAB5AP20339 215 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 GABRR1P24046 479 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 AKR1C1Q04828 323 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SQSTM1Q13501 440 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 EXOSC6Q5RKV6 272 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ADGRG3Q86Y34 549 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 OR14L1PQ8NHC6 308 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 C22orf15Q8WYQ4 148 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 DAZLQ92904 295 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RBM38Q9H0Z9 239 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF286AQ9HBT8 521 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ABCA1O95477 2261 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 C9J4A7 227 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ERVK-16P61578 105 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 ELAVL3Q14576 367 aaKnown RBP8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CTSL3PQ5NE16 218 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 FBXW12Q6X9E4 464 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 RNF111Q6ZNA4 994 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 CRYGNQ8WXF5 182 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SGCZQ96LD1 299 aa8.16□□□□□ -1.1
COL6A6-201ENST00000358511 SRRQ9GZT4 340 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms