RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 FJX1Q86VR8 437 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ATG16L2Q8NAA4 619 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 C9orf106Q8NAJ2 232 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ADPRHL1Q8NDY3 354 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 GTPBP3Q969Y2 492 aaKnown RBP13.61□□□□□ -0.23
TPM1-206ENST00000358278 FEVQ99581 238 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 VKORC1Q9BQB6 163 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 TTYH2Q9BSA4 534 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 ZNF556Q9HAH1 456 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 MGAT4BQ9UQ53 548 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 MEMO1Q9Y316 297 aa13.61□□□□□ -0.23
TPM1-206ENST00000358278 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
TPM1-206ENST00000358278 UBR5O95071 2799 aaPredicted RBP13.6□□□□□ -0.23
TPM1-206ENST00000358278 MBD3L4A6NDZ8 208 aaPredicted RBP13.6□□□□□ -0.23
TPM1-206ENST00000358278 MBD3L3A6NE82 208 aaPredicted RBP13.6□□□□□ -0.23
TPM1-206ENST00000358278 MBD3L5A6NJ08 208 aaPredicted RBP13.6□□□□□ -0.23
TPM1-206ENST00000358278 C11orf98E9PRG8 122 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 RAMP1O60894 148 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 VAMP5O95183 116 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 GASTP01350 101 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 IL2RAP01589 272 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 PRKACGP22612 351 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 PUDPQ08623 228 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 TSPAN31Q12999 210 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 OR2A2Q6IF42 318 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 GCNT2Q8N0V5 402 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 KDM8Q8N371 416 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 OR51A7Q8NH64 312 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 MBD3L2Q8NHZ7 208 aaPredicted RBP13.6□□□□□ -0.23
TPM1-206ENST00000358278 GPA33Q99795 319 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 PSD2Q9BQI7 771 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 RNF122Q9H9V4 155 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 RASD1Q9Y272 281 aa13.6□□□□□ -0.23
TPM1-206ENST00000358278 A0A1B0GUH1 482 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 UNC119BA6NIH7 251 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 PLPP3O14495 311 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 RNF13O43567 381 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 ADAP00813 363 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 GLI4P10075 376 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 ANXA8P13928 327 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 TIMP3P35625 211 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 GSSP48637 474 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 P2RY4P51582 365 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 RPL18Q07020 188 aaKnown RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 PMPCAQ10713 525 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 TMEM211Q6ICI0 200 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 FANK1Q8TC84 345 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 INTS12Q96CB8 462 aaKnown RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 CIB1Q99828 191 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 DGCR6LQ9BY27 220 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 CLEC4AQ9UMR7 237 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 CACNA1CQ13936 2221 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 A0A1W2PNV4 684 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 KLF4O43474 513 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 SERPINI2O75830 405 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 ZNF43P17038 809 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 GSTM3P21266 225 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 UQCRC1P31930 480 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 RPS4XP62701 263 aaKnown RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 ANKDD1AQ495B1 522 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 ZBED5Q49AG3 693 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 SEM1Q6ZVN7 128 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 MARVELD2Q8N4S9 558 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 EME1Q96AY2 570 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 GMPPAQ96IJ6 420 aaPredicted RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 ZFP3Q96NJ6 502 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 DMRTA2Q96SC8 542 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 SF3B5Q9BWJ5 86 aaKnown RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 GLRX2Q9NS18 164 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 EMC3Q9P0I2 261 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 STX18Q9P2W9 335 aaKnown RBP13.59□□□□□ -0.23
TPM1-206ENST00000358278 HIF3AQ9Y2N7 669 aa13.59□□□□□ -0.23
TPM1-206ENST00000358278 MS4A18H0YCH9 400 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 PYCARD-AS1I3L0S3 204 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 PDLIM1O00151 329 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 LRRTM2O43300 516 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 RCBTB2O95199 551 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 TMIGD3P0DMS9 266 aaPredicted RBP13.58□□□□□ -0.24
TPM1-206ENST00000358278 AQP2P41181 271 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 PRPS1P60891 318 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 POU3F1Q03052 451 aaPredicted RBP13.58□□□□□ -0.24
TPM1-206ENST00000358278 C1DQ13901 141 aaKnown RBP13.58□□□□□ -0.24
TPM1-206ENST00000358278 SLC17A1Q14916 467 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 TRIP10Q15642 601 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 MS4A18Q3C1V0 323 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 ALG10Q5BKT4 473 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 NCCRP1Q6ZVX7 275 aaPredicted RBP13.58□□□□□ -0.24
TPM1-206ENST00000358278 EPHX4Q8IUS5 362 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 UEVLDQ8IX04 471 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 RND1Q92730 232 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 GABARAPL1Q9H0R8 117 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 TAS2R5Q9NYW4 299 aa13.58□□□□□ -0.24
TPM1-206ENST00000358278 SIGLEC7Q9Y286 467 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms