RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ING1Q9UK53 422 aaPredicted RBP13.26□□□□□ -0.29
CCNE1-202ENST00000357943 CLEC4AQ9UMR7 237 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 MEMO1Q9Y316 297 aa13.26□□□□□ -0.29
CCNE1-202ENST00000357943 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 E9PLN8 166 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 HIST1H2ABP04908 130 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 TSPAN19P0C672 248 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 GLI4P10075 376 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 AHCYP23526 432 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 FPR3P25089 353 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 GSSP48637 474 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 RPS4XP62701 263 aaKnown RBP13.25□□□□□ -0.29
CCNE1-202ENST00000357943 RASGEF1BQ0VAM2 473 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 PMPCAQ10713 525 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 TSPAN31Q12999 210 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 HIST3H2AQ7L7L0 130 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 NANOGNBQ7Z5D8 188 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 STK32CQ86UX6 486 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 FJX1Q86VR8 437 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 HIPK1Q86Z02 1210 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 SLC43A2Q8N370 569 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 GNPDA2Q8TDQ7 276 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 HIST1H2ACQ93077 130 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF775Q96BV0 537 aaPredicted RBP13.25□□□□□ -0.29
CCNE1-202ENST00000357943 TNFRSF13CQ96RJ3 184 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 DMRTA2Q96SC8 542 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 CIB1Q99828 191 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 VKORC1Q9BQB6 163 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 DGCR6LQ9BY27 220 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 B3GAT1Q9P2W7 334 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 HIF3AQ9Y2N7 669 aa13.25□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF716A6NP11 495 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 C11orf98E9PRG8 122 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 CCL21O00585 134 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 LRRTM2O43300 516 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 HPRP00739 348 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 FCGR2AP12318 317 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 HLA-DOBP13765 273 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ZNF26P17031 533 aaPredicted RBP13.24□□□□□ -0.29
CCNE1-202ENST00000357943 UQCRC1P31930 480 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 TIMP3P35625 211 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 AQP2P41181 271 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 PTDSS1P48651 473 aaKnown RBP13.24□□□□□ -0.29
CCNE1-202ENST00000357943 SLC9A3P48764 834 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 DAPP51397 102 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 FXYD6P3P58550 94 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 RPL18Q07020 188 aaKnown RBP13.24□□□□□ -0.29
CCNE1-202ENST00000357943 PUDPQ08623 228 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 SLC17A1Q14916 467 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 SVOPLQ8N434 492 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 NAXEQ8NCW5 288 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ADPRHL1Q8NDY3 354 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 MOSPD2Q8NHP6 518 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 INTS12Q96CB8 462 aaKnown RBP13.24□□□□□ -0.29
CCNE1-202ENST00000357943 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 MCCC2Q9HCC0 563 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 KLHL9Q9P2J3 617 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 IL20RAQ9UHF4 553 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 RASD1Q9Y272 281 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ESPL1Q14674 2120 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 A0A1W2PNV4 684 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 UNC119BA6NIH7 251 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 PTP4A3O75365 173 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 VAMP5O95183 116 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 RCBTB2O95199 551 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ADAP00813 363 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 GTF2A1P52655 376 aaPredicted RBP13.24□□□□□ -0.29
CCNE1-202ENST00000357943 PER3P56645 1201 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 IL1RL1Q01638 556 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 FOXF2Q12947 444 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 RNPS1Q15287 305 aaKnown RBP13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ZBED5Q49AG3 693 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ATG16L2Q8NAA4 619 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 ENKD1Q9H0I2 346 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 SMURF2Q9HAU4 748 aa13.24□□□□□ -0.29
CCNE1-202ENST00000357943 RNF13O43567 381 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 SERPINI2O75830 405 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 OR6A2O95222 327 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 PLGP00747 810 aaPredicted RBP13.23□□□□□ -0.29
CCNE1-202ENST00000357943 IL2RAP01589 272 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 F13BP05160 661 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 ANXA8P13928 327 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 CEACAM8P31997 349 aaPredicted RBP13.23□□□□□ -0.29
CCNE1-202ENST00000357943 SLC16A1P53985 500 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 ZP4Q12836 540 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 POU4F3Q15319 338 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 ALG10Q5BKT4 473 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 GTF2IRD2BQ6EKJ0 949 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 FAHD1Q6P587 224 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 THSD4Q6ZMP0 1018 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 GTF2IRD2Q86UP8 949 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 KIF18BQ86Y91 864 aa13.23□□□□□ -0.29
CCNE1-202ENST00000357943 MCEMP1Q8IX19 187 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms