RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ENPP1P22413 925 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 ELAVL4P26378 380 aaKnown RBP16.08■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF417Q8TAU3 575 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 CDCP1Q9H5V8 836 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
COL27A1-201ENST00000356083 SULT1C2O00338 296 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 OLFM2O95897 454 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 MRPL19P49406 292 aaKnown RBP16.08■□□□□ 0.16
COL27A1-201ENST00000356083 NDRG3Q9UGV2 375 aa16.08■□□□□ 0.16
COL27A1-201ENST00000356083 BLVRBP30043 206 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 DDX31Q9H8H2 851 aaKnown RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CACNA1IQ9P0X4 2223 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 MROH2AA6NES4 1674 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 MEIOCA2RUB1 952 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 SORBS2O94875 1100 aaKnown RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 GALNT9Q9HCQ5 603 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 OR5G3P0C626 314 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 RAB5CP51148 216 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 IRF4Q15306 451 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 OR2M7Q8NG81 312 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 SLC2A11Q9BYW1 496 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 GAREM1Q9H706 876 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 SPTBN1Q01082 2364 aaKnown RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF593O00488 134 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 S1PR4O95977 384 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 DTYMKP23919 212 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 C10orf62Q5T681 223 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CPEB2Q7Z5Q1 589 aaKnown RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CPXM2Q8N436 756 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 NETO1Q8TDF5 533 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 TMEM208Q9BTX3 173 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 METTL9Q9H1A3 318 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 PCNX2A6NKB5 2137 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 NUDT19A8MXV4 375 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 ADIRFQ15847 76 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 C4orf32Q8N8J7 132 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 OR5B3Q8NH48 314 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 SMIM12Q96EX1 92 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 NMNAT1Q9HAN9 279 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 RNASET2O00584 256 aaKnown RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 PIRO00625 290 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CD1DP15813 335 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 TMEM64Q6YI46 380 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 H2BFWTQ7Z2G1 175 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 VRK2Q86Y07 508 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 C15orf54Q8N8G6 183 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CPNE4Q96A23 557 aaPredicted RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 FOXQ1Q9C009 403 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 PARP12Q9H0J9 701 aaKnown RBP16.07■□□□□ 0.16
COL27A1-201ENST00000356083 NAGKQ9UJ70 344 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 CACNG2Q9Y698 323 aa16.07■□□□□ 0.16
COL27A1-201ENST00000356083 ENTPD8Q5MY95 495 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 OR1S2Q8NGQ3 325 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 SLC41A2Q96JW4 573 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF587Q96SQ5 575 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-201ENST00000356083 M0QZ24 198 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 CT45A10P0DMU9 189 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 TAS2R46P59540 309 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 BPIFB2Q8N4F0 458 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 TMEM178AQ8NBL3 297 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 C1orf74Q96LT6 269 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ANKRD19PQ9H560 264 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ACOT13Q9NPJ3 140 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 DOCK11Q5JSL3 2073 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 A0A0D9SG52 128 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 KLHL33A6NCF5 533 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 SRPX2O60687 465 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-201ENST00000356083 TMEM244Q5VVB8 128 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ADAMTS19Q8TE59 1207 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ONECUT1Q9UBC0 465 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 SRPK3Q9UPE1 567 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 AKAP12Q02952 1782 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 SLC5A10A0PJK1 596 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 KLF11O14901 512 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 P2RX3P56373 397 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 CDRT4Q8N9R6 151 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 THAP7Q9BT49 309 aaPredicted RBP16.06■□□□□ 0.16
COL27A1-201ENST00000356083 NDFIP1Q9BT67 221 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ANKRD61A6NGH8 418 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 S100A4P26447 101 aaKnown RBP16.06■□□□□ 0.16
COL27A1-201ENST00000356083 LINC00346Q8IVM7 164 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 EDAQ92838 391 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 TRIB1Q96RU8 372 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 TIMM29Q9BSF4 260 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 LIN7CQ9NUP9 197 aaKnown RBP16.06■□□□□ 0.16
COL27A1-201ENST00000356083 PIGLQ9Y2B2 252 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 DCTP40126 519 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 GPR176Q14439 515 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 TECRLQ5HYJ1 363 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 SLC2A13Q96QE2 648 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 BARHL1Q9BZE3 327 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 ZMAT5Q9UDW3 170 aaKnown RBP16.06■□□□□ 0.16
COL27A1-201ENST00000356083 EBF1Q9UH73 591 aa16.06■□□□□ 0.16
COL27A1-201ENST00000356083 AKAP11Q9UKA4 1901 aa16.05■□□□□ 0.16
COL27A1-201ENST00000356083 H3BNC9 293 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms