RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 ZNF721Q8TF20 911 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ADIPOR1Q96A54 375 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 C8orf44Q96CB5 159 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 VMP1Q96GC9 406 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 HS6ST2Q96MM7 605 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 FEVQ99581 238 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF426Q9BUY5 554 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 CNPPD1Q9BV87 410 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 ITPAQ9BY32 194 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 TRIM2Q9C040 744 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 VCX3AQ9NNX9 186 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 MAN2C1Q9NTJ4 1040 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 UBAP1Q9NZ09 502 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 OR10H1Q9Y4A9 318 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 KCNE3Q9Y6H6 103 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 MAU2Q9Y6X3 613 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 U3KQV3 271 aa6.29□□□□□ -1.4
VPS13A-201ENST00000355766 PRRC2AP48634 2157 aaKnown RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 CACNA1CQ13936 2221 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SERINC4A6NH21 518 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 OR6C70A6NIJ9 312 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 FAM90A27PA6NNH2 459 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF701M0R085 212 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 M0R3G1 203 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 CHP2O43745 196 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 NME6O75414 186 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 CLPTM1O96005 669 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 HEXAP06865 529 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 HEXBP07686 556 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 GNAO1P09471 354 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 OSMP13725 252 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 TBXA2RP21731 343 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 KRT20P35900 424 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 GGT2P36268 569 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 RPL5P46777 297 aaKnown RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SLC6A8P48029 635 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 HLCSP50747 726 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF136P52737 540 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 PNLIPRP2P54317 469 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SUMO3P55854 103 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 NRG3P56975 720 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 CDC42P60953 191 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ISL1P61371 349 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 MYBPC1Q00872 1141 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 MYBPHQ13203 477 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 NPTX1Q15818 432 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 EXT1Q16394 746 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ANKDD1AQ495B1 522 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 KLHL26Q53HC5 615 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 KRTCAP3Q53RY4 240 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ZNF766Q5HY98 468 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 FGD3Q5JSP0 725 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SLC25A30Q5SVS4 291 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 MRPL2Q5T653 305 aaKnown RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 FNDC7Q5VTL7 733 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 PGBD2Q6P3X8 592 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 CLEC9AQ6UXN8 241 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 C3P1Q6ZMU1 363 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 DGAT2L6Q6ZPD8 337 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 PLEKHM3Q6ZWE6 761 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 DOLPP1Q86YN1 238 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 GHDCQ8N2G8 530 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SLC5A8Q8N695 610 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SLC15A4Q8N697 577 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 AQP11Q8NBQ7 271 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 TSPAN14Q8NG11 270 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 OR10Q1Q8NGQ4 319 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 PIGXQ8TBF5 258 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 DNAJA4Q8WW22 397 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 IPCEF1Q8WWN9 437 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-201ENST00000355766 ASB5Q8WWX0 329 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 TSLPQ969D9 159 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 C18orf12Q96KH6 178 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 LPAR4Q99677 370 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 TUBA1CQ9BQE3 449 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 TEX12Q9BXU0 123 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 UCK2Q9BZX2 261 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 WWTR1Q9GZV5 400 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SMURF2Q9HAU4 748 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 SLC25A19Q9HC21 320 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 PLCXD1Q9NUJ7 323 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 MED17Q9NVC6 651 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 CHST2Q9Y4C5 530 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 NINQ8N4C6 2090 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 MYO7BQ6PIF6 2116 aa6.28□□□□□ -1.4
VPS13A-201ENST00000355766 FN1P02751 2386 aaKnown RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 IGHV1-45A0A0A0MS14 117 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 A0A0B4J2E0 115 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TRBV4-1A0A0J9YWV2 114 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 A0A1B0GX12 115 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 NKX2-6A6NCS4 301 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ZAR1LA6NP61 321 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ALG1L2C9J202 215 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 NPIPA5E9PKD4 350 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 M0R3H8 397 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SCDO00767 359 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 OR10H3O60404 316 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 EIF4E2O60573 245 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms