RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 H3BSH0 61 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ANXA2P07355 339 aaKnown RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 ADH7P40394 386 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 SLC1A3P43003 542 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 OR2L3Q8NG85 312 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ORAI1Q96D31 301 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 SOSTQ9BQB4 213 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 NOX3Q9HBY0 568 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 CYSLTR2Q9NS75 346 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 KLHL28Q9NXS3 571 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 FBXL3Q9UKT7 428 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 NUP210Q8TEM1 1887 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 COL4A3Q01955 1670 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3DA0A087WVF3 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3IA0A087WXS9 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3EA0A087X179 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3KA0A087X1G2 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 UBE2QL1A1L167 161 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 CXorf65A6NEN9 183 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3FA6NER0 549 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 MPTX1A8MV57 137 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3LB9A6J9 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 CDC42EP2O14613 210 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 EMC8O43402 210 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 OR2T1O43869 369 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBX19O60806 448 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 MRPL3P09001 348 aaKnown RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3HP0C7X1 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 GSTM3P21266 225 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 MST1P26927 711 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 GJA4P35212 333 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ANXA11P50995 505 aaKnown RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 E2F1Q01094 437 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ST3GAL3Q11203 375 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 STX4Q12846 297 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 PLA2G7Q13093 441 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 GFOD2Q3B7J2 385 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3GQ6DHY5 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3CQ6IPX1 549 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 UNQ6126/PRO20091Q6UXV3 157 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 SLC29A4Q7RTT9 530 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 CEACAM19Q7Z692 300 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 TBC1D3Q8IZP1 549 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 ZNF433Q8N7K0 673 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 OR2L5Q8NG80 312 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 GNPDA2Q8TDQ7 276 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 SMARCD2Q92925 531 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 SLC35A4Q96G79 324 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 VRK1Q99986 396 aaPredicted RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 DPH1Q9BZG8 443 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 ISG20L2Q9H9L3 353 aaKnown RBP8.63□□□□□ -1.03
SMG6-202ENST00000354901 SLC7A7Q9UM01 511 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 PCDHB10Q9UN67 800 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
SMG6-202ENST00000354901 EYSQ5T1H1 3165 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 LOC100509620A0A075B734 347 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 A0A1W2PQU0 124 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 URADA6NGE7 173 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 KCNAB3O43448 404 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 FADS1O60427 444 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 REM1O75628 298 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 EML2O95834 649 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 TXNDC12O95881 172 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 ZNF888P0CJ79 500 aaPredicted RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 F3P13726 295 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 NME1P15531 152 aaKnown RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 GAS1P54826 345 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 CLDN12P56749 244 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 RNF4P78317 190 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 RAB40BQ12829 278 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 TMEM31Q5JXX7 168 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 SLC48A1Q6P1K1 146 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 SFXN4Q6P4A7 337 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 C7orf61Q8IZ16 206 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 OR7G2Q8NG99 324 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 OR10H5Q8NGA6 315 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 OR56A1Q8NGH5 318 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 OR10G6Q8NH81 332 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 LCN9Q8WX39 176 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 ACOT11Q8WXI4 607 aaPredicted RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 ENKD1Q9H0I2 346 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 OR51V1Q9H2C8 321 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 C8orf33Q9H7E9 229 aaPredicted RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 HINT3Q9NQE9 182 aaKnown RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 ZFP57Q9NU63 452 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 PIPOXQ9P0Z9 390 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 TRDV1A0A1B0GX56 115 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 MEIS3P1A6NDR6 274 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 ZNF879B4DU55 563 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 HPP00738 406 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 LIPCP11150 499 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 PEBP1P30086 187 aaKnown RBP8.62□□□□□ -1.03
SMG6-202ENST00000354901 IFNGR2P38484 337 aa8.62□□□□□ -1.03
SMG6-202ENST00000354901 GMFBP60983 142 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms