RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ZNF317Q96PQ6 595 aaPredicted RBP13.79□□□□□ -0.2
PDGFA-201ENST00000354513 SOX7Q9BT81 388 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 KATNB1Q9BVA0 655 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 SPATA9Q9BWV2 254 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 TPT1P8Q9HAU6 139 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 OBP2BQ9NPH6 170 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 CA10Q9NS85 328 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 PMF1-BGLAPU3KQ54 211 aa13.79□□□□□ -0.2
PDGFA-201ENST00000354513 CRISP3P54108 245 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 SRSF2Q01130 221 aaKnown RBP13.78□□□□□ -0.2
PDGFA-201ENST00000354513 HGFACQ04756 655 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 PRAMEF8Q5VWM4 474 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 PRAMEF7Q5VXH5 474 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 NIPAL3Q6P499 406 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 KLHL24Q6TFL4 600 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 C10orf111Q8N326 155 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 MAGEE2Q8TD90 523 aaPredicted RBP13.78□□□□□ -0.2
PDGFA-201ENST00000354513 MSI2Q96DH6 328 aaKnown RBP13.78□□□□□ -0.2
PDGFA-201ENST00000354513 ZNF837Q96EG3 531 aaPredicted RBP13.78□□□□□ -0.2
PDGFA-201ENST00000354513 OR52B2Q96RD2 323 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 LINC00470Q9BZP3 86 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
PDGFA-201ENST00000354513 NPHS2Q9NP85 383 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 SDR39U1Q9NRG7 319 aaPredicted RBP13.78□□□□□ -0.2
PDGFA-201ENST00000354513 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
PDGFA-201ENST00000354513 A0A096LPE4 126 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 A0A1W2PPZ6 126 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF587BE7ETH6 402 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 LMX1BO60663 402 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 SLC22A3O75751 556 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 TGDSO95455 350 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 IGKV3-15P01624 115 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 IL6P05231 212 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 TROVE2P10155 538 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDGFA-201ENST00000354513 CRATP43155 626 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 PDLIM4P50479 330 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 SEC24CP53992 1094 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 AQP5P55064 265 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 GGTLC2Q14390 218 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 EFNB3Q15768 340 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 C3orf36Q3SXR2 165 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 TMEM225Q6GV28 225 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 C6orf89Q6UWU4 347 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 WDFY1Q8IWB7 410 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 MFSD8Q8NHS3 518 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 STK35Q8TDR2 534 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.21
PDGFA-201ENST00000354513 ZBTB18Q99592 522 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 TAPBPLQ9BX59 468 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 CALML5Q9NZT1 146 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 ZIM2Q9NZV7 527 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 LPAR3Q9UBY5 353 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 RASD1Q9Y272 281 aa13.77□□□□□ -0.21
PDGFA-201ENST00000354513 IGKV1D-42A0A075B6H8 117 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 A0A0G2JPF8 293 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 GMNCA6NCL1 334 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 HNRNPCL2B2RXH8 293 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 HNRNPCL3B7ZW38 293 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 HNRNPCL1O60812 293 aaKnown RBP13.76□□□□□ -0.21
PDGFA-201ENST00000354513 PDE5AO76074 875 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 VAMP5O95183 116 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 HNRNPCL4P0DMR1 293 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 BMP2P12643 396 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 IDO1P14902 403 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 HTR2AP28223 471 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 SERPINF1P36955 418 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 RPS5P46782 204 aaKnown RBP13.76□□□□□ -0.21
PDGFA-201ENST00000354513 GZMKP49863 264 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 CLDN17P56750 224 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 SNRPD2P62316 118 aaKnown RBP13.76□□□□□ -0.21
PDGFA-201ENST00000354513 ROR2Q01974 943 aaKnown RBP13.76□□□□□ -0.21
PDGFA-201ENST00000354513 ANKRD16Q6P6B7 361 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 EPGNQ6UW88 154 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 MSANTD1Q6ZTZ1 278 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 ABHD12BQ7Z5M8 362 aaPredicted RBP13.76□□□□□ -0.21
PDGFA-201ENST00000354513 MSRB3Q8IXL7 192 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 GTF2H4Q92759 462 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 MAL2Q969L2 176 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 PIMREGQ9BSJ6 248 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 BEX2Q9BXY8 128 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 PLK3Q9H4B4 646 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 BCL2L10Q9HD36 194 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 FKBP7Q9Y680 259 aa13.76□□□□□ -0.21
PDGFA-201ENST00000354513 A0A096LPI6 279 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 TMEM129A0AVI4 362 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 NDUFS8O00217 210 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 TRAF3IP2O43734 574 aaPredicted RBP13.75□□□□□ -0.21
PDGFA-201ENST00000354513 AHSA1O95433 338 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 OR4A8P0C604 315 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 BMP4P12644 408 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 NCF2P19878 526 aaPredicted RBP13.75□□□□□ -0.21
PDGFA-201ENST00000354513 PPOXP50336 477 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 COPZ1P61923 177 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 ARF1P84077 181 aaKnown RBP13.75□□□□□ -0.21
PDGFA-201ENST00000354513 SF3A3Q12874 501 aaKnown RBP eCLIP13.75□□□□□ -0.21
PDGFA-201ENST00000354513 LARS2Q15031 903 aaKnown RBP13.75□□□□□ -0.21
PDGFA-201ENST00000354513 PHYHD1Q5SRE7 291 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms