RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 RNF13O43567 381 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 NEURL1O76050 574 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 OR6A2O95222 327 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 RAB36O95755 333 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 CNR1P21554 472 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 AHCYP23526 432 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 SLC16A1P53985 500 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 RPS7P62081 194 aaKnown RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 RAB40BQ12829 278 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 OR1C1Q15619 314 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 GPR107Q5VW38 600 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 MEPCEQ7L2J0 689 aaKnown RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 SHFQ7M4L6 423 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 GHDCQ8N2G8 530 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 GTPBP8Q8N3Z3 284 aaPredicted RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 LSM14AQ8ND56 463 aaKnown RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 C9orf43Q8TAL5 461 aaPredicted RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 MRPS18AQ9NVS2 196 aaKnown RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 WARS2Q9UGM6 360 aaKnown RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 KLK13Q9UKR3 277 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 PTHP01270 115 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 CLUP10909 449 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 IMPDH2P12268 514 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 MFSD13AQ14CX5 517 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 AGAP7PQ5VUJ5 663 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 FAM122BQ7Z309 247 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 OR9Q1Q8NGQ5 310 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 FCGR1BQ92637 280 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 AGAP4Q96P64 663 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 NMNAT3Q96T66 252 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 MRPL39Q9NYK5 338 aaKnown RBP18.51■□□□□ 0.55
TRIM4-202ENST00000354241 GRHPRQ9UBQ7 328 aa18.51■□□□□ 0.55
TRIM4-202ENST00000354241 NCKAP5O14513 1909 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 M0R3G1 203 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 PLPP3O14495 311 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 ZIC3O60481 467 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 APEHP13798 732 aaKnown RBP18.5■□□□□ 0.55
TRIM4-202ENST00000354241 SDHAP31040 664 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 SFTPDP35247 375 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 MYBPHQ13203 477 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 GLYR1Q49A26 553 aaPredicted RBP18.5■□□□□ 0.55
TRIM4-202ENST00000354241 UBE2UQ5VVX9 321 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 B3GLCTQ6Y288 498 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 JAZF1Q86VZ6 243 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 TSPAN32Q96QS1 320 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 OR5B2Q96R09 309 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 INIPQ9NRY2 104 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 DIMT1Q9UNQ2 313 aaKnown RBP18.5■□□□□ 0.55
TRIM4-202ENST00000354241 CORINQ9Y5Q5 1042 aa18.5■□□□□ 0.55
TRIM4-202ENST00000354241 LRRC3CA6NJW4 275 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 LIPT2A6NK58 231 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 PLGP00747 810 aaPredicted RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 GYPBP06028 91 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 ATP6V1E1P36543 226 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 SYT6Q5T7P8 510 aaPredicted RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 OR4F15Q8NGB8 312 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 SLC25A43Q8WUT9 341 aaPredicted RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 CRELD1Q96HD1 420 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 FGF20Q9NP95 211 aaPredicted RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 RSL24D1Q9UHA3 163 aaKnown RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 CLEC2DQ9UHP7 191 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 ZNF346Q9UL40 294 aaKnown RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 FREM3P0C091 2139 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 A0A1W2PNR3 127 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 PINLYPA6NC86 204 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 IMPA2O14732 288 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 SHC1P29353 583 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 SRD5A2P31213 254 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 C19orf57Q0VDD7 668 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 CNPY1Q3B7I2 92 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 TMEM176BQ3YBM2 270 aaPredicted RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 LEG1Q6P5S2 330 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 NPEPL1Q8NDH3 523 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 ZPLD1Q8TCW7 415 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 HES7Q9BYE0 225 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 ALKBH4Q9NXW9 302 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 BOKQ9UMX3 212 aaPredicted RBP18.49■□□□□ 0.55
TRIM4-202ENST00000354241 POLHQ9Y253 713 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 ERGIC3Q9Y282 383 aa18.49■□□□□ 0.55
TRIM4-202ENST00000354241 OR2M5A3KFT3 312 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 CCDC182A6NF36 153 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 SLC22A31A6NKX4 558 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 ZNF891A8MT65 544 aaPredicted RBP18.48■□□□□ 0.55
TRIM4-202ENST00000354241 RFPL3SP0C7P2 107 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 SPINK2P20155 84 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 SLC2A5P22732 501 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 DCKP27707 260 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 CDC20Q12834 499 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 KRR1Q13601 381 aaKnown RBP18.48■□□□□ 0.55
TRIM4-202ENST00000354241 OR51G2Q8NGK0 314 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 SLC39A7Q92504 469 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 FAM173AQ9BQD7 235 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 CHST11Q9NPF2 352 aa18.48■□□□□ 0.55
TRIM4-202ENST00000354241 TXNDC12O95881 172 aa18.47■□□□□ 0.55
TRIM4-202ENST00000354241 ZNF17P17021 662 aa18.47■□□□□ 0.55
TRIM4-202ENST00000354241 MYL12AP19105 171 aa18.47■□□□□ 0.55
TRIM4-202ENST00000354241 FKBP2P26885 142 aaKnown RBP18.47■□□□□ 0.55
TRIM4-202ENST00000354241 CDKN2AP42771 156 aaKnown RBP18.47■□□□□ 0.55
TRIM4-202ENST00000354241 CCL11P51671 97 aa18.47■□□□□ 0.55
TRIM4-202ENST00000354241 SOX8P57073 446 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms