RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PHF1O43189 567 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PSTPIP1O43586 416 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FGF17O60258 216 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR10H3O60404 316 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 LYPD3O95274 346 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 KRT6AP02538 564 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TROVE2P10155 538 aaKnown RBP eCLIP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 GCFC2P16383 781 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MGMTP16455 207 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 BCL3P20749 454 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 IMPDH1P20839 514 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CD38P28907 300 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CFHR2P36980 270 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TSFMP43897 325 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ALDH3B2P48448 385 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MRPS21P82921 87 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FKBP3Q00688 224 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 REG3AQ06141 175 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SPAG1Q07617 926 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 FASTKD3Q14CZ7 662 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ABRAXAS2Q15018 415 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF672Q499Z4 452 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 C14orf28Q4W4Y0 310 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DDI2Q5TDH0 399 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR8G2PQ6IF36 304 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 LRRC31Q6UY01 552 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 IQCF2Q8IXL9 164 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CCDC65Q8IXS2 484 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 METTL27Q8N6F8 245 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ASCC1Q8N9N2 400 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR13F1Q8NGS4 319 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 SETD7Q8WTS6 366 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CA5BP1Q8WTZ4 195 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HAVCR1Q96D42 359 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DYNLL2Q96FJ2 89 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF641Q96N77 438 aaPredicted RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 OR5B2Q96R09 309 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 CNN2Q99439 309 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HSD17B14Q9BPX1 270 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MAPKAP1Q9BPZ7 522 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 RNF126Q9BV68 326 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HINT2Q9BX68 163 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 HAUS4Q9H6D7 363 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 DHRS4-AS1Q9P1J3 65 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MMP17Q9ULZ9 603 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 TIAM2Q8IVF5 1701 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 PARP4Q9UKK3 1724 aaKnown RBP1.32□□□□□ -2.2
BRCA1-202ENST00000354071 UBN2Q6ZU65 1347 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 NAV2Q8IVL1 2488 aa1.32□□□□□ -2.2
BRCA1-202ENST00000354071 MEIOCA2RUB1 952 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PRR23AA6NEV1 266 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP29-1A8MX34 341 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 NDUFS8O00217 210 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 BMPR1BO00238 502 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 GOSR2O14653 212 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 TYROBPO43914 113 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CXCL13O43927 109 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OR2F2O95006 317 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OTCP00480 354 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 IGLV2-11P01706 119 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CRYGCP07315 174 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 HSD17B1P14061 328 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 BCKDHBP21953 392 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CD80P33681 288 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 HMGA2P52926 109 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 C21orf59P57076 290 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 RAB11AP62491 216 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CDKL1Q00532 357 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OGDHQ02218 1023 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CSTF1Q05048 431 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 RAB11BQ15907 218 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 FAM83EQ2M2I3 478 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 HLA-BQ31612 363 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PLCXD3Q63HM9 321 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 LCLAT1Q6UWP7 414 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ASCL4Q6XD76 172 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OTUD6AQ7L8S5 288 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PAQR7Q86WK9 346 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ERICH1Q86X53 443 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 TGIF2LXQ8IUE1 241 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 COMMD1Q8N668 190 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 LILRB4Q8NHJ6 448 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 GPX8Q8TED1 209 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 AENQ8WTP8 325 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 DUS3LQ96G46 650 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF597Q96LX8 424 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 OR5B12Q96R08 314 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MCHR1Q99705 422 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 WDR13Q9H1Z4 485 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 BLZF1Q9H2G9 400 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 MTHFD2LQ9H903 347 aaPredicted RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PNO1Q9NRX1 252 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ELOVL2Q9NXB9 296 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 WARS2Q9UGM6 360 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 ASIC3Q9UHC3 531 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 CA5BQ9Y2D0 317 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 N6AMT1Q9Y5N5 214 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 STYXL1Q9Y6J8 313 aa1.31□□□□□ -2.2
BRCA1-202ENST00000354071 PHRF1Q9P1Y6 1649 aaKnown RBP1.31□□□□□ -2.2
BRCA1-202ENST00000354071 SCN7AQ01118 1682 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms