RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CLDN12P56749 244 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 YOD1Q5VVQ6 348 aaPredicted RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 FCRL6Q6DN72 434 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 BEND4Q6ZU67 534 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 OR5D18Q8NGL1 313 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 OR5J2Q8NH18 312 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 OR5M11Q96RB7 305 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 TP63Q9H3D4 680 aaPredicted RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 PLA2G3Q9NZ20 509 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 CHRNA9Q9UGM1 479 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 IGHV3-15A0A0B4J1V0 119 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 FCARP24071 287 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 THBS2P35442 1172 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 ZNF45Q02386 682 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 SNTB2Q13425 540 aaKnown RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 ESPNLQ6ZVH7 1005 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 IL17RDQ8NFM7 739 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 GOT1L1Q8NHS2 421 aaPredicted RBP12.59□□□□□ -0.39
SMC6-201ENST00000351948 SLCO4A1Q96BD0 722 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 VN1R1Q9GZP7 353 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 SLC5A7Q9GZV3 580 aa12.59□□□□□ -0.39
SMC6-201ENST00000351948 KLK10O43240 276 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 MT-CO3P00414 261 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 SLC26A5P58743 744 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 RNF4P78317 190 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 PUDPQ08623 228 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 NDUFAF7Q7L592 441 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 POGLUT1Q8NBL1 392 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 SMAP2Q8WU79 429 aaPredicted RBP12.58□□□□□ -0.39
SMC6-201ENST00000351948 HRASLS5Q96KN8 279 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 CLEC2DQ9UHP7 191 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 SPTBP11277 2137 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 SCN3AQ9NY46 2000 aa12.58□□□□□ -0.39
SMC6-201ENST00000351948 ASPDHA6ND91 283 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 AGAP5A6NIR3 686 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 FPR3P25089 353 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 GPR50Q13585 617 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 KIAA0040Q15053 153 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 SLC15A4Q8N697 577 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 ZNF615Q8N8J6 731 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 OR51T1Q8NGJ9 327 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 FBXO9Q9UK97 447 aaPredicted RBP12.58□□□□□ -0.4
SMC6-201ENST00000351948 HHLA2Q9UM44 414 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 WIF1Q9Y5W5 379 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 SELENOFO60613 162 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 OR7A10O76100 309 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 IFNA21P01568 189 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 RLN2P04090 185 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 IRF2P14316 349 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 SLC1A3P43003 542 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 HCCSP53701 268 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 FOXL2P58012 376 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 PRTGQ2VWP7 1150 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 ZNF813Q6ZN06 617 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 PLCZ1Q86YW0 608 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 GPR119Q8TDV5 335 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 ZC3HAV1LQ96H79 300 aaKnown RBP12.58□□□□□ -0.4
SMC6-201ENST00000351948 OR10A2Q9H208 303 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 A0A1W2PS29 197 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 CDHR4A6H8M9 788 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
SMC6-201ENST00000351948 IGHV4-34P06331 123 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 CCL4P13236 92 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 EIF1P41567 113 aaKnown RBP12.58□□□□□ -0.4
SMC6-201ENST00000351948 PWWP2BQ6NUJ5 590 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 OR6Q1Q8NGQ2 317 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 NT5CQ8TCD5 201 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 TSSK2Q96PF2 358 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 CACNA1IQ9P0X4 2223 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 KCNE1BA0A087WTH5 132 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 TTLL8A6PVC2 850 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 CNOT2Q9NZN8 540 aaKnown RBP12.58□□□□□ -0.4
SMC6-201ENST00000351948 RASD1Q9Y272 281 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.4
SMC6-201ENST00000351948 TOXO94900 526 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 PRH1P02810 166 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 GABRR1P24046 479 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 OPRL1P41146 370 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 CPT1CQ8TCG5 803 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 HAVCR1Q96D42 359 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 ZG16BQ96DA0 208 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 POLE3Q9NRF9 147 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 L7N2F9 121 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 RAB3AP20336 220 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 VAMP2P63027 116 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 TMEM53Q6P2H8 277 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 TMEM179BQ7Z7N9 219 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 OR13C9Q8NGT0 318 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 ACTR6Q9GZN1 396 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 OLAHQ9NV23 265 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 NLKQ9UBE8 527 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 CCDC187A0A096LP49 1063 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 TEX51A0A1B0GUA7 166 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 GNRHRP30968 328 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 MEP1BQ16820 701 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 KDM4DQ6B0I6 523 aa12.57□□□□□ -0.4
SMC6-201ENST00000351948 ACSM5Q6NUN0 579 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms