RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SSX6Q7RTT6 188 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 SZRD1Q7Z422 152 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 UBE3DQ7Z6J8 389 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 C11orf96Q7Z7L8 435 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 VRK2Q86Y07 508 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PHOSPHO1Q8TCT1 267 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CD99L2Q8TCZ2 262 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TFGQ92734 400 aaPredicted RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 KLK6Q92876 244 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 MIB2Q96AX9 1013 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PELI1Q96FA3 418 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CNTNAP3BQ96NU0 1288 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 VRK1Q99986 396 aaPredicted RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 PAPOLGQ9BWT3 736 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 TLNRD1Q9H1K6 362 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 CCDC86Q9H6F5 360 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 ASF1BQ9NVP2 202 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 METTL1Q9UBP6 276 aaKnown RBP9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 MTFP1Q9UDX5 166 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 OR5V1Q9UGF6 321 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 MOKQ9UQ07 419 aa9.48□□□□□ -0.89
CHRNA1-202ENST00000348749 A0A1B0GTI1 187 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM200CA6NKL6 621 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 DUXAA6NLW8 204 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 PIN1P1O15428 100 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 ST8SIA5O15466 376 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 TGM5O43548 720 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 GPRIN2O60269 458 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 RBBP9O75884 186 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 PMS2P2O95744 297 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 ACTL6AO96019 429 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 CD79AP11912 226 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 CSF2RBP32927 897 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SSR2P43308 183 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 CENPAP49450 140 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SIRPAP78324 504 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SP3Q02447 781 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 TGM3Q08188 693 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SMCO1Q147U7 214 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC9A5Q14940 896 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 CEBPEQ15744 281 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM52BQ4KMG9 183 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 RAB12Q6IQ22 244 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 C11orf87Q6NUJ2 197 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 LPCAT3Q6P1A2 487 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 RTL10Q7L3V2 364 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 AMZ2Q86W34 360 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 BEST3Q8N1M1 668 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 OR5AR1Q8NGP9 310 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC39A7Q92504 469 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 ARL11Q969Q4 196 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 PEX11GQ96HA9 241 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 HS6ST2Q96MM7 605 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 IL17FQ96PD4 163 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 MCHR1Q99705 422 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF471Q9BX82 626 aaPredicted RBP9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 QRSL1Q9H0R6 528 aaKnown RBP9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 NOX4Q9NPH5 578 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM100Q9NV29 134 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 OR10H1Q9Y4A9 318 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC22A7Q9Y694 548 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 V9GY05 133 aa9.47□□□□□ -0.89
CHRNA1-202ENST00000348749 COL4A3Q01955 1670 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 RNF222A6NCQ9 220 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 OR2W5A6NFC9 320 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 ZNF729A6NN14 1252 aaPredicted RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 SPINT1O43278 529 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 HMGN2P05204 90 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 C8AP07357 584 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 GKN3PP0CG01 181 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 PTHLHP12272 177 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 BMP7P18075 431 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 CSNK2A2P19784 350 aaPredicted RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 BTF3P20290 206 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 VEGFBP49765 207 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 RGS8P57771 180 aaPredicted RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 ST8SIA6P61647 398 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 FOXK2Q01167 660 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 CAP1Q01518 475 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 ZIC1Q15915 447 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 EIF2S3LQ2VIR3 472 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 PCGF3Q3KNV8 242 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 CDNFQ49AH0 187 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 MRM1Q6IN84 353 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 CNKSR3Q6P9H4 555 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 ACOT7LQ6ZUV0 252 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 SLC43A2Q8N370 569 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 C15orf54Q8N8G6 183 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 BOLLQ8N9W6 283 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 RPS4Y2Q8TD47 263 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 CCDC107Q8WV48 283 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 TMEM41AQ96HV5 264 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 COX14Q96I36 57 aa9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 SMAD5Q99717 465 aaKnown RBP9.46□□□□□ -0.89
CHRNA1-202ENST00000348749 MENTQ9BUN1 341 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms