RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FANCFQ9NPI8 374 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 ACOT13Q9NPJ3 140 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 WDR70Q9NW82 654 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 H2AFY2Q9P0M6 372 aaPredicted RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 SEC14L4Q9UDX3 406 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 ZNF346Q9UL40 294 aaKnown RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.89□□□□□ -0.836e-6■■■■□ 22.5
ECM1-201ENST00000346569 TRAPPC4Q9Y296 219 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 EXOGQ9Y2C4 368 aaKnown RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 CEPT1Q9Y6K0 416 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 CPAMD8Q8IZJ3 1885 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR2M5A3KFT3 312 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 A6NL46 340 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 FAM183AA6NL82 134 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SNTNA6NMZ2 147 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 PRR23D1E9PI22 279 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 M0R082 166 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 TLX3O43711 291 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 SEC14L2O76054 403 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 F13BP05160 661 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 PRR23D2P0DMB1 279 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 SLC2A5P22732 501 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 DCKP27707 260 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SHC1P29353 583 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 NOS3P29474 1203 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 IDUAP35475 653 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 RPL4P36578 427 aaKnown RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 CASRP41180 1078 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 CDKN2AP42771 156 aaKnown RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 MTNR1AP48039 350 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 GTF2A1P52655 376 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 CDH11P55287 796 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 GPR85P60893 370 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 RAC1P63000 192 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 RAB40BQ12829 278 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 CDC20Q12834 499 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 MYBPHQ13203 477 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SELENBP1Q13228 472 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 TMED1Q13445 227 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 CRMP1Q14194 572 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 RAB39AQ14964 217 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 NEDD8Q15843 81 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 ZNF239Q16600 458 aaKnown RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 TMEM176BQ3YBM2 270 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 EMC4Q5J8M3 183 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SYT6Q5T7P8 510 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 UBE2UQ5VVX9 321 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 GPR139Q6DWJ6 353 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SLC25A25Q6KCM7 469 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 PLBD1Q6P4A8 553 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 B3GNT6Q6ZMB0 384 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 H1FNTQ75WM6 255 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 SULF2Q8IWU5 870 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SCAIQ8N9R8 606 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR2M7Q8NG81 312 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR52E2Q8NGJ4 325 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR52I1Q8NGK6 324 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR13F1Q8NGS4 319 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR4K13Q8NH42 304 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 ZNF417Q8TAU3 575 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 TMEM80Q96HE8 168 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 Q96M85 177 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 JSRP1Q96MG2 331 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 ZNF587Q96SQ5 575 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 HDGFL3Q9Y3E1 203 aa9.88□□□□□ -0.83
ECM1-201ENST00000346569 SPIN1Q9Y657 262 aaPredicted RBP9.88□□□□□ -0.83
ECM1-201ENST00000346569 OR5H15A6NDH6 313 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 CCDC182A6NF36 153 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 RIIAD1A6NNX1 92 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ZNF99A8MXY4 864 aaPredicted RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 H3BML4 177 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 J3QRE1 110 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 CEACAM4O75871 244 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 INMTO95050 263 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 IFNGP01579 166 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 SP1P08047 785 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ADORA3P0DMS8 318 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 TFPIP10646 304 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ZNF17P17021 662 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ZNF3P17036 446 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 SPINK2P20155 84 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 SDHAP31040 664 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 P2RY4P51582 365 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 CCL11P51671 97 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 GP2P55259 537 aaKnown RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.87□□□□□ -0.83
ECM1-201ENST00000346569 C19orf57Q0VDD7 668 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 FOXC1Q12948 553 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 OR7A5Q15622 319 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 TBCEQ15813 527 aaPredicted RBP9.87□□□□□ -0.83
ECM1-201ENST00000346569 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.87□□□□□ -0.83
ECM1-201ENST00000346569 NIPAL3Q6P499 406 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 TMPPEQ6ZT21 453 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 GID4Q8IVV7 300 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 EXD3Q8N9H8 876 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 CYB561A3Q8NBI2 242 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ADPRHL1Q8NDY3 354 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 ATP6V1C2Q8NEY4 427 aa9.87□□□□□ -0.83
ECM1-201ENST00000346569 C9orf43Q8TAL5 461 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms