RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 SLC16A7O60669 478 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ITGA5P08648 1049 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 PPP3CBP16298 524 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ATF1P18846 271 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 CXADRP78310 365 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 GPR18Q14330 331 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 PRSS53Q2L4Q9 553 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM31Q5JXX7 168 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 DPY19L2P2Q6ZN68 376 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 Q6ZSR6 202 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 RTL10Q7L3V2 364 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 PNLDC1Q8NA58 520 aaKnown RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 HAVCR2Q8TDQ0 301 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 PHYHIPQ92561 330 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 SDHCQ99643 169 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 C6orf106Q9H6K1 298 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 GDE1Q9NZC3 331 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 TCRBV21S2A2A0A5A6 115 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF705EA8MWA4 302 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 C17orf105B2RV13 164 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 SRPX2O60687 465 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 LILRB3O75022 631 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 TPOP07202 933 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 SLC6A1P30531 599 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 FAM76BQ5HYJ3 339 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 LIPNQ5VXI9 398 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ANKRD33Q7Z3H0 272 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 GTPBP8Q8N3Z3 284 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 THAP3Q8WTV1 239 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 LMF2Q9BU23 707 aaKnown RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ULBP3Q9BZM4 244 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 EVA1BQ9NVM1 165 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ASF1BQ9NVP2 202 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 KLK11Q9UBX7 282 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF593O00488 134 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 GREM1O60565 184 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 NUDT1P36639 197 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 DLSTP36957 453 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 CEBPGP53567 150 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 MAT1AQ00266 395 aaKnown RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 WBP2NLQ6ICG8 309 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 LILRA6Q6PI73 481 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 CFAP77Q6ZQR2 320 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 TMPRSS9Q7Z410 1059 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 C17orf47Q8NEP4 570 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 GIMAP5Q96F15 307 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 SCGB3A2Q96PL1 93 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 KRBOX1C9JBD0 128 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 RORAP35398 523 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 LIMS1P48059 325 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 TAGLNQ01995 201 aaKnown RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 CHAF1BQ13112 559 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 DYRK1AQ13627 763 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 ALKBH1Q13686 389 aaKnown RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 NFATC4Q14934 902 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 MCATQ8IVS2 390 aaKnown RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SLC25A44Q96H78 314 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 KIR3DX1Q9H7L2 352 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 CIB4A0PJX0 185 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 MEGF11A6BM72 1044 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SERINC4A6NH21 518 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 TLX3O43711 291 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 PRKACAP17612 351 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 CDK2P24941 298 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SPOCK1Q08629 439 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 EIF2B1Q14232 305 aaKnown RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 FAM46BQ96A09 425 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 RADILQ96JH8 1075 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SLC6A18Q96N87 628 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 BCL2L14Q9BZR8 327 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 PDE7BQ9NP56 450 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 EMC3Q9P0I2 261 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 FBXL4Q9UKA2 621 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SLC6A5Q9Y345 797 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 IFITM5A6NNB3 132 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SCGB1D2O95969 90 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 HOXB9P17482 250 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 CLPPQ16740 277 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 EOGTQ5NDL2 527 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 GPAT4Q86UL3 456 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 ANGPTL6Q8NI99 470 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SEC22AQ96IW7 307 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SIGLEC11Q96RL6 698 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF587Q96SQ5 575 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 PELOQ9BRX2 385 aaKnown RBP14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SDHAF2Q9NX18 166 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 CYP8B1Q9UNU6 501 aa14.3□□□□□ -0.12
PTPRU-201ENST00000345512 SBF1O95248 1867 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 hCG_1807616A0A1W2PRN6 198 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF726A6NNF4 738 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 CA3P07451 260 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SFTPBP07988 381 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 MMP15P51511 669 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 UBE2MP61081 183 aaKnown RBP14.29□□□□□ -0.12
PTPRU-201ENST00000345512 IDO2Q6ZQW0 420 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 SMIM4Q8WVI0 70 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 OR1E3Q8WZA6 343 aa14.29□□□□□ -0.12
PTPRU-201ENST00000345512 STACQ99469 402 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms