RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CCDC103Q8IW40 242 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 LINC00471Q8N535 108 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 TMEM99Q8N816 258 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 NAXEQ8NCW5 288 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 ADPRHL1Q8NDY3 354 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 TMEM255BQ8WV15 326 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 SGTBQ96EQ0 304 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 RSRC1Q96IZ7 334 aaKnown RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 PRSS27Q9BQR3 290 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 PTDSS2Q9BVG9 487 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 NDEL1Q9GZM8 345 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 BCO1Q9HAY6 547 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 MRPL39Q9NYK5 338 aaKnown RBP10.55□□□□□ -0.72
SNCA-202ENST00000345009 ZNF229Q9UJW7 825 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 CLEC4AQ9UMR7 237 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 TMEM5Q9Y2B1 443 aa10.55□□□□□ -0.72
SNCA-202ENST00000345009 ICE1Q9Y2F5 2266 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 LOC102725191A0A1B0GVB3 256 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 FTCDNL1E5RQL4 147 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 GNGT2O14610 69 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 MSTNO14793 375 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 AKAP8O43823 692 aaKnown RBP10.54□□□□□ -0.72
SNCA-202ENST00000345009 MRPL33O75394 65 aaKnown RBP10.54□□□□□ -0.72
SNCA-202ENST00000345009 TNFSF13O75888 250 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 ZNF43P17038 809 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 FUT1P19526 365 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 AGTR1P30556 359 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 RRM2P31350 389 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 KIR2DL2P43627 348 aaPredicted RBP10.54□□□□□ -0.72
SNCA-202ENST00000345009 ASCL1P50553 236 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 SPIBQ01892 262 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 GK3PQ14409 553 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 ZNF74Q16587 644 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 ANKDD1AQ495B1 522 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 ABLIM2Q6H8Q1 611 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 WDR88Q6ZMY6 472 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 TSPYL5Q86VY4 417 aaPredicted RBP10.54□□□□□ -0.72
SNCA-202ENST00000345009 KIF18BQ86Y91 864 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 TUSC5Q8IXB3 177 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 OR5J2Q8NH18 312 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 OR52J3Q8NH60 311 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 STARD4Q96DR4 205 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 BPIFA2Q96DR5 249 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 OXGR1Q96P68 337 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 PSD2Q9BQI7 771 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 CHID1Q9BWS9 393 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 REEP1Q9H902 201 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 PLSCR4Q9NRQ2 329 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
SNCA-202ENST00000345009 TESMINQ9Y4I5 508 aa10.54□□□□□ -0.72
SNCA-202ENST00000345009 NCOA6Q14686 2063 aaPredicted RBP10.54□□□□□ -0.72
SNCA-202ENST00000345009 OR6C65A6NJZ3 312 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 FAM90A27PA6NNH2 459 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 ENO4A6NNW6 628 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 M0R082 166 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 DIRAS1O95057 198 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 PRSS23O95084 383 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 BGLAPP02818 100 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 SAGP10523 405 aaPredicted RBP10.53□□□□□ -0.72
SNCA-202ENST00000345009 IFI30P13284 250 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 CBLP22681 906 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 AHCYP23526 432 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 MAGEA2P43356 314 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 PUDPQ08623 228 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 SLC17A1Q14916 467 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 POU4F3Q15319 338 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 GUSBP1Q15486 140 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 BEND4Q6ZU67 534 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 MBOAT2Q6ZWT7 520 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 NANOGNBQ7Z5D8 188 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 BTLAQ7Z6A9 289 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 PXKQ7Z7A4 578 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 UEVLDQ8IX04 471 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 NRMQ8IXM6 262 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 OR9K2Q8NGE7 335 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 ZNF417Q8TAU3 575 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 CANT1Q8WVQ1 401 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 MOGAT1Q96PD6 335 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 ALPK1Q96QP1 1244 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 ZNF587Q96SQ5 575 aaPredicted RBP10.53□□□□□ -0.72
SNCA-202ENST00000345009 MEPEQ9NQ76 525 aaPredicted RBP10.53□□□□□ -0.72
SNCA-202ENST00000345009 MAN2C1Q9NTJ4 1040 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 ELOVL5Q9NYP7 299 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 NOX1Q9Y5S8 564 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 ADGRG4Q8IZF6 3080 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 CACNA1CQ13936 2221 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 BAHCC1Q9P281 2608 aa10.53□□□□□ -0.72
SNCA-202ENST00000345009 A0A087WUU8 490 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 TCRBV3S1A0A5B6 114 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 ZNF716A6NP11 495 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 EFCAB9A8MZ26 197 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 BLOC1S5-TXNDC5H3BN57 136 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 TNFRSF11BO00300 401 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 PLPP3O14495 311 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 FZD7O75084 574 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 OR7A10O76100 309 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 CNOT4O95628 575 aaKnown RBP10.52□□□□□ -0.73
SNCA-202ENST00000345009 CST1P01037 141 aa10.52□□□□□ -0.73
SNCA-202ENST00000345009 ADORA3P0DMS8 318 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms