RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TMEM156Q8N614 296 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 PEX11GQ96HA9 241 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 SLC16A7O60669 478 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 ITGB2P05107 769 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 ZNF561Q8N587 486 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 DPF3Q92784 378 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 NAA11Q9BSU3 229 aaPredicted RBP16.77■□□□□ 0.27
SMC4-201ENST00000344722 CHST2Q9Y4C5 530 aa16.77■□□□□ 0.27
SMC4-201ENST00000344722 AIPO00170 330 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 TP53I11O14683 189 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 PCMT1P22061 227 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 GDI1P31150 447 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 PFN3P60673 137 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 RAB33AQ14088 237 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 DLK2Q6UY11 383 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 GRASPQ7Z6J2 395 aaPredicted RBP16.76■□□□□ 0.27
SMC4-201ENST00000344722 OR11A1Q9GZK7 315 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 MCCC2Q9HCC0 563 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 C17orf113A0A1B0GUU1 675 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 LRIT2A6NDA9 550 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 TAAR5O14804 337 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 AIFM1O95831 613 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 CPMP14384 443 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 MPEG1Q2M385 716 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 TMEM41BQ5BJD5 291 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 OR7E24Q6IFN5 339 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 SENP5Q96HI0 755 aaPredicted RBP16.76■□□□□ 0.27
SMC4-201ENST00000344722 FBXO7Q9Y3I1 522 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 MT-CO2P00403 227 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 PLP2Q04941 152 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 TM4SF18Q96CE8 201 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 DTD2Q96FN9 168 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 PLEKHA3Q9HB20 300 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 FGF20Q9NP95 211 aaPredicted RBP16.76■□□□□ 0.27
SMC4-201ENST00000344722 PRSS16Q9NQE7 514 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 NUP98P52948 1817 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 CD300LBA8K4G0 201 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 EPHA5P54756 1037 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 AKR1C1Q04828 323 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 KIAA1958Q8N8K9 716 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 BBS1Q8NFJ9 593 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 SPTSSAQ969W0 71 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 WDR76Q9H967 626 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 SLC25A19Q9HC21 320 aa16.76■□□□□ 0.27
SMC4-201ENST00000344722 DNAJC25-GNG10A0A024R161 153 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 RNGTTO60942 597 aaKnown RBP16.75■□□□□ 0.27
SMC4-201ENST00000344722 HEXBP07686 556 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 EPHA2P29317 976 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 SLC22A6Q4U2R8 563 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 ACSM5Q6NUN0 579 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 UQCC3Q6UW78 93 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 NPRL2Q8WTW4 380 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 C12orf10Q9HB07 376 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 TMEM100Q9NV29 134 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 A0A1W2PP55 124 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 CPED1A4D0V7 1026 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 HOXB2P14652 356 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 VASPP50552 380 aaPredicted RBP16.75■□□□□ 0.27
SMC4-201ENST00000344722 ZNF705AQ6ZN79 300 aaPredicted RBP16.75■□□□□ 0.27
SMC4-201ENST00000344722 Q6ZTK2 550 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 ADGRE4PQ86SQ3 457 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 A0A0U1RQK1 487 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 TMEM189-UBE2V1I3L0A0 370 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 LPLP06858 475 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 HOXB9P17482 250 aaPredicted RBP16.75■□□□□ 0.27
SMC4-201ENST00000344722 MRPL19P49406 292 aaKnown RBP16.75■□□□□ 0.27
SMC4-201ENST00000344722 CPXM2Q8N436 756 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 PDXPQ96GD0 296 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 KLHL13Q9P2N7 655 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 CBY1Q9Y3M2 126 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 RHOP08100 348 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 RFX2P48378 723 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 SERTAD2Q14140 314 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 DPY19L2P2Q6ZN68 376 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 RELL2Q8NC24 303 aaPredicted RBP16.75■□□□□ 0.27
SMC4-201ENST00000344722 OR51Q1Q8NH59 317 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 TAAR8Q969N4 342 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 ZNF681Q96N22 645 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 SCPEP1Q9HB40 452 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 GMEB2Q9UKD1 530 aa16.75■□□□□ 0.27
SMC4-201ENST00000344722 MSTNO14793 375 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 TEAD1P28347 426 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 RPL34P49207 117 aaKnown RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 MARCH8Q5T0T0 291 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 ST6GAL2Q96JF0 529 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 ZNF160Q9HCG1 818 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 A0A1W2PQU0 124 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 GLTPD2A6NH11 291 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 HHLA1C9JL84 531 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 FGF18O76093 207 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 POU3F3P20264 500 aaPredicted RBP16.74■□□□□ 0.27
SMC4-201ENST00000344722 GABRR1P24046 479 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 SMUG1Q53HV7 270 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 LIPIQ6XZB0 460 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 TMEM25Q86YD3 366 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 RAB3CQ96E17 227 aa16.74■□□□□ 0.27
SMC4-201ENST00000344722 AMDHD1Q96NU7 426 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms