RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 BAP18Q8IXM2 172 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 IZUMO1Q8IYV9 350 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3Q8IZP1 549 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CBARPQ8N350 705 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR10H4Q8NGA5 316 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR4D9Q8NGE8 314 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR56B1Q8NGI3 324 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 DNAJB3Q8WWF6 145 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 LCN9Q8WX39 176 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SMIM19Q96E16 107 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PIK3IP1Q96FE7 263 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ASB16Q96NS5 453 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CHST5Q9GZS9 411 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SLITRK2Q9H156 845 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 RHOFQ9HBH0 211 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ZDHHC3Q9NYG2 299 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 KLK11Q9UBX7 282 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SLC35A3Q9Y2D2 325 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SIRT4Q9Y6E7 314 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PRSS21Q9Y6M0 314 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 KIF26AQ9ULI4 1882 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CFAP54Q96N23 3096 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 BPTFQ12830 3046 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 A0A087WUU8 490 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 A0A087X0M5 115 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TMEM272A0A1B0GTI8 110 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 A0A1B0GX30 115 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 IFITM5A6NNB3 132 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SEC14L6B5MCN3 397 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 STMND1H3BQB6 276 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 H3BRB1 525 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 H7C417 338 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CLDN4O14493 209 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SEPT4O43236 478 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CD74P04233 296 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 GJA1P17302 382 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 NDUFB7P17568 137 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CD22P20273 847 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TACR2P21452 398 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 C5AR1P21730 350 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 RGRP47804 291 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 KHKP50053 298 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PRKXP51817 358 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 F2RL1P55085 397 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ACTBP60709 375 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ACTG1P63261 375 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 GPNMBQ14956 572 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 DECR1Q16698 335 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PCGF3Q3KNV8 242 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CLEC12AQ5QGZ9 265 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 HIST2H3PS2Q5TEC6 136 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PRAMEF8Q5VWM4 474 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PRAMEF7Q5VXH5 474 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TNFAIP8L2Q6P589 184 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 COMMD6Q7Z4G1 85 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 C11orf96Q7Z7L8 435 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CPOQ8IVL8 374 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CCDC116Q8IYX3 515 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SYS1Q8N2H4 156 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CLDN19Q8N6F1 224 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR4D11Q8NGI4 311 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR4A4PQ8NGN8 299 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR1J2Q8NGS2 313 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR2G2Q8NGZ5 317 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SUN3Q8TAQ9 357 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SYNPRQ8TBG9 265 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 C16orf78Q8WTQ4 265 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SOCS4Q8WXH5 440 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 RSC1A1Q92681 617 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 GHSRQ92847 366 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 MIB2Q96AX9 1013 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SLC25A38Q96DW6 304 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 MYEOVQ96EZ4 313 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 MEGF10Q96KG7 1140 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 C4orf36Q96KX1 117 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CLCC1Q96S66 551 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PRRX2Q99811 253 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 EFCAB11Q9BUY7 163 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SFXN1Q9H9B4 322 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 BCO1Q9HAY6 547 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ZFYVE1Q9HBF4 777 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 MRPS30Q9NP92 439 aaKnown RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ACKR4Q9NPB9 350 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 RPS10P5Q9NQ39 176 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 HINT3Q9NQE9 182 aaKnown RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 C2orf42Q9NWW7 574 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 LPAR3Q9UBY5 353 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 MTFP1Q9UDX5 166 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ATXN7L1Q9ULK2 861 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ASF1AQ9Y294 204 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PCDHGC4Q9Y5F7 938 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 DNAH12Q6ZR08 3092 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 NLRC5Q86WI3 1866 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 UPK3BL1B0FP48 263 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 UPK3BL2E5RIL1 263 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 RNASEK-C17orf49H0YIS7 233 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MKRN2OSH3BPM6 223 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 M0R3H8 397 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 SULT2B1O00204 365 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms