RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 PIM3Q86V86 326 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CPNE8Q86YQ8 564 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 FOXJ1Q92949 421 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 C4orf36Q96KX1 117 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OSMRQ99650 979 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 LRFN3Q9BTN0 628 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CD244Q9BZW8 370 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DOK5Q9P104 306 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PITPNC1Q9UKF7 332 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 NRAPQ86VF7 1730 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 GRIN3BO60391 1043 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 TCRBP04435 133 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ITGB5P18084 799 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 HBA1P69905 142 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DND1Q8IYX4 353 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 C19orf47Q8N9M1 422 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 L3MBTL4Q8NA19 623 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 EID2BQ96D98 161 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SENP5Q96HI0 755 aaPredicted RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 MEGF10Q96KG7 1140 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SENP8Q96LD8 212 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 MVB12BQ9H7P6 319 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 B4GALT6Q9UBX8 382 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 KLK4Q9Y5K2 254 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OR5K4A6NMS3 321 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ANKRD63C9JTQ0 380 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 F5H5K5 113 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ACP2P11117 423 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 TCN2P20062 427 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 GDNFP39905 211 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OR3A1P47881 315 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CNN3Q15417 329 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 C9orf57Q5W0N0 161 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 NCR3LG1Q68D85 454 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ZNF343Q6P1L6 599 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SFXN4Q6P4A7 337 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PIWIL3Q7Z3Z3 882 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 DCXRQ7Z4W1 244 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ZDHHC14Q8IZN3 488 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 LRRC52Q8N7C0 313 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 TMIGD2Q96BF3 282 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CLMPQ9H6B4 373 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DERAQ9Y315 318 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 TRAV34A0A0B4J273 112 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DRGXA6NNA5 263 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 GJB1P08034 283 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 FGF4P08620 206 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OR12D1P0DN82 309 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 NDUFS1P28331 727 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SNRPEP62304 92 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 HLA-BQ31612 363 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 FAM196AQ6ZSG2 479 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 LRRC56Q8IYG6 542 aaPredicted RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 OR52E2Q8NGJ4 325 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PHOSPHO1Q8TCT1 267 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SLC2A13Q96QE2 648 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 RANBP9Q96S59 729 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SLC25A18Q9H1K4 315 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SLC35B3Q9H1N7 401 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 NRIP3Q9NQ35 241 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 PADI1Q9ULC6 663 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CRYABP02511 175 aaKnown RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 OPN1MWP04001 364 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 C8AP07357 584 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OR8U8P0C7N1 319 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OPN1MW2P0DN77 364 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OPN1MW3P0DN78 364 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SCARF1Q14162 830 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 LRFN4Q6PJG9 635 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OPN5Q6U736 354 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SHFQ7M4L6 423 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ZNF384Q8TF68 577 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 LRRN4Q8WUT4 740 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CASD1Q96PB1 797 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 PRO1933Q9H354 126 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 DTLQ9NZJ0 730 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 C11orf98E9PRG8 122 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ABLIM3O94929 683 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 TPOP07202 933 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 NHLH1Q02575 133 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ZNF528Q3MIS6 628 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 GPR33Q49SQ1 333 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 TMEM184AQ6ZMB5 413 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 FBXO16Q8IX29 292 aaPredicted RBP5.77□□□□□ -1.49
VCAN-203ENST00000343200 KIAA1958Q8N8K9 716 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 CHST14Q8NCH0 376 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 UBALD1Q8TB05 177 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SLC46A1Q96NT5 459 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 ANKRD19PQ9H560 264 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 OR5V1Q9UGF6 321 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 SLC22A7Q9Y694 548 aa5.77□□□□□ -1.49
VCAN-203ENST00000343200 A6NL46 340 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 B4DXG7 233 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 SMIM17P0DL12 118 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 GABRR1P24046 479 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 EFNA3P52797 238 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 IL10RBQ08334 325 aa5.76□□□□□ -1.49
VCAN-203ENST00000343200 PLK5Q496M5 336 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms