RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 MAP2K6P52564 334 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 H3F3AP84243 136 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 POU3F1Q03052 451 aaPredicted RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 TFF3Q07654 80 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 C1DQ13901 141 aaKnown RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 SLC17A1Q14916 467 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 GUSBP1Q15486 140 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 SLC25A35Q3KQZ1 300 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 FAM98BQ52LJ0 330 aaKnown RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 ZNF787Q6DD87 383 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 RRM2BQ7LG56 351 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 SLC46A3Q7Z3Q1 461 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 NANOGNBQ7Z5D8 188 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 ADGRG5Q8IZF4 528 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 SLC7A13Q8TCU3 470 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 UTP4Q969X6 686 aaKnown RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 EMC6Q9BV81 110 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 IL1RAPQ9NPH3 570 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 MED29Q9NX70 200 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 CACNA1DQ01668 2161 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 RNF13O43567 381 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 CIB2O75838 187 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 OR6A2O95222 327 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 GADD45GO95257 159 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 HIST1H2ABP04908 130 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 F13BP05160 661 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 ITGA2P17301 1181 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 CDH2P19022 906 aaPredicted RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 SELENOPP49908 381 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 CLDN17P56750 224 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 MELKQ14680 651 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 IQCCQ4KMZ1 466 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 NIPAL3Q6P499 406 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 H1FNTQ75WM6 255 aaPredicted RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 ASRGL1Q7L266 308 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 HIST3H2AQ7L7L0 130 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 GALNT5Q7Z7M9 940 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 WDFY1Q8IWB7 410 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 OR13C2Q8NGS9 318 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 OR51A7Q8NH64 312 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 LINC01560Q8TB33 94 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 HIST1H2ACQ93077 130 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 BPIFA2Q96DR5 249 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 ZC3HAV1LQ96H79 300 aaKnown RBP11.72□□□□□ -0.53
TUBD1-202ENST00000340993 ZNF426Q9BUY5 554 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 VNN3Q9NY84 501 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 EMC3Q9P0I2 261 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 FLVCR1Q9Y5Y0 555 aa11.72□□□□□ -0.53
TUBD1-202ENST00000340993 LRBAP50851 2863 aa11.71□□□□□ -0.53
TUBD1-202ENST00000340993 TACC2O95359 2948 aa11.71□□□□□ -0.53
TUBD1-202ENST00000340993 ERICH4A6NGS2 130 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 MRPL33O75394 65 aaKnown RBP11.71□□□□□ -0.54
TUBD1-202ENST00000340993 OR7A10O76100 309 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 CGAP01215 116 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 POU2F1P14859 743 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 ZNF43P17038 809 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 AGAP20933 346 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 AQP2P41181 271 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 IST1P53990 364 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 TOP3AQ13472 1001 aaPredicted RBP11.71□□□□□ -0.54
TUBD1-202ENST00000340993 MTX3Q5HYI7 312 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.54
TUBD1-202ENST00000340993 TFAP2EQ6VUC0 442 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 MEX3BQ6ZN04 569 aaKnown RBP11.71□□□□□ -0.54
TUBD1-202ENST00000340993 PIK3C3Q8NEB9 887 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 OR5J2Q8NH18 312 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 MOSPD2Q8NHP6 518 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 TXNDC15Q96J42 360 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 CHID1Q9BWS9 393 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 POLR2J2Q9GZM3 115 aaKnown RBP11.71□□□□□ -0.54
TUBD1-202ENST00000340993 POLR2J3Q9H1A7 115 aaKnown RBP11.71□□□□□ -0.54
TUBD1-202ENST00000340993 BCO1Q9HAY6 547 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 B3GAT1Q9P2W7 334 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 IL20RAQ9UHF4 553 aa11.71□□□□□ -0.54
TUBD1-202ENST00000340993 A8MXE2 369 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 MS4A18H0YCH9 400 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 PLPP3O14495 311 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 CDC42EP2O14613 210 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 DNPH1O43598 174 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 LYZL6O75951 148 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 IL18BPO95998 194 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 RBM34P42696 430 aaKnown RBP11.7□□□□□ -0.54
TUBD1-202ENST00000340993 FOXG1P55316 489 aaPredicted RBP11.7□□□□□ -0.54
TUBD1-202ENST00000340993 PUDPQ08623 228 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 MS4A18Q3C1V0 323 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 C5orf46Q6UWT4 87 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
TUBD1-202ENST00000340993 EPHX4Q8IUS5 362 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 UEVLDQ8IX04 471 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 OR4K5Q8NGD3 323 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 OR9Q2Q8NGE9 314 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 ACOT11Q8WXI4 607 aaPredicted RBP11.7□□□□□ -0.54
TUBD1-202ENST00000340993 ALKBH3Q96Q83 286 aaPredicted RBP11.7□□□□□ -0.54
TUBD1-202ENST00000340993 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 FKRPQ9H9S5 495 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 GLRX2Q9NS18 164 aa11.7□□□□□ -0.54
TUBD1-202ENST00000340993 HRNRQ86YZ3 2850 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms