RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MDP1Q86V88 176 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF101Q8IZC7 436 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 Q8N1Y9 231 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 OR4C13Q8NGP0 309 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 PIGXQ8TBF5 258 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 IPCEF1Q8WWN9 437 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 UBE2E3Q969T4 207 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 KLHL29Q96CT2 875 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 ERP27Q96DN0 273 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 ZNF317Q96PQ6 595 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 NUDT16L1Q9BRJ7 211 aaKnown RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 SERTAD4Q9NUC0 356 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 PARPBPQ9NWS1 579 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 MRPL15Q9P015 296 aaKnown RBP9.09□□□□□ -0.95
ATXN3-201ENST00000340660 ZNRD1Q9P1U0 126 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 SLC9A8Q9Y2E8 581 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 NOX1Q9Y5S8 564 aa9.09□□□□□ -0.95
ATXN3-201ENST00000340660 ETS1P14921 441 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 SLC6A2P23975 617 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 ARR3P36575 388 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 PTDSS1P48651 473 aaKnown RBP9.08□□□□□ -0.96
ATXN3-201ENST00000340660 ZNF117Q03924 483 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 PDK4Q16654 411 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 SPRNQ5BIV9 151 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 LRRC28Q86X40 367 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-201ENST00000340660 CALHM3Q86XJ0 350 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 VSTM4Q8IW00 320 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 TMCO5AQ8N6Q1 288 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 AURKBQ96GD4 344 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-201ENST00000340660 FRMD8P1Q9BZ68 369 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-201ENST00000340660 NMUR2Q9GZQ4 415 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 SEMA6AQ9H2E6 1030 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 HSD3B7Q9H2F3 369 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 TAS2R9Q9NYW1 312 aa9.08□□□□□ -0.96
ATXN3-201ENST00000340660 TANC2Q9HCD6 1990 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 GXYLT2A0PJZ3 443 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 RAMP3O60896 148 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 NGFRP08138 427 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 WNT2P09544 360 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 MMP9P14780 707 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 GABRB3P28472 473 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 CFHR2P36980 270 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 PIK3CBP42338 1070 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 HSPA7P48741 367 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 RPS23P62266 143 aaKnown RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 CSNK2A1P68400 391 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 COX10Q12887 443 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 ZMYND11Q15326 602 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 GLE1Q53GS7 698 aaKnown RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 GKAP1Q5VSY0 366 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 CBLN3Q6UW01 205 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 POMGNT2Q8NAT1 580 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 SLC35B2Q8TB61 432 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 SNX33Q8WV41 574 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 LRRC39Q96DD0 335 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 PDLIM5Q96HC4 596 aaKnown RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 ALKBH3Q96Q83 286 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 HHATLQ9HCP6 504 aa9.07□□□□□ -0.96
ATXN3-201ENST00000340660 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
ATXN3-201ENST00000340660 IGLV3-9A0A075B6K5 115 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 ZCWPW2A0A1B0GU75 182 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 CEACAM18A8MTB9 384 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 B2RBV5 119 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 AKR1B15C9JRZ8 316 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 P2RY10O00398 339 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 PLOD3O60568 738 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 RSL1D1O76021 490 aaKnown RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 CHRM4P08173 479 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 LTA4HP09960 611 aaKnown RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 PTX3P26022 381 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 PSMD4P55036 377 aaKnown RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 HABP2Q14520 560 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 C3orf33Q6P1S2 294 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 UNQ9370/PRO34162Q6UXP9 181 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 OVCH2Q7RTZ1 564 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 ZBED8Q8IZ13 594 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 SCCPDHQ8NBX0 429 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 ZNF669Q96BR6 464 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 THOC1Q96FV9 657 aaKnown RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 CLPTM1LQ96KA5 538 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 QRSL1Q9H0R6 528 aaKnown RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 Q9N2J8 555 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 MRTO4Q9UKD2 239 aaKnown RBP9.06□□□□□ -0.96
ATXN3-201ENST00000340660 X6R8D5 127 aa9.06□□□□□ -0.96
ATXN3-201ENST00000340660 SCDO00767 359 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 TM9SF1O15321 606 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 DEDDO75618 318 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 NUDT14O95848 222 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 SCG5P05408 212 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 KLK1P06870 262 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 OR8G3PP0DMU2 310 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 RPL11P62913 178 aaKnown RBP9.05□□□□□ -0.96
ATXN3-201ENST00000340660 CD83Q01151 205 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 GALK2Q01415 458 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 CUL3Q13618 768 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 SLC29A2Q14542 456 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 TSNQ15631 228 aaKnown RBP9.05□□□□□ -0.96
ATXN3-201ENST00000340660 SLC18A3Q16572 532 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 SLC25A53Q5H9E4 307 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 MROH9Q5TGP6 573 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms