RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SPTA1P02549 2419 aa12□□□□□ -0.49
USP47-202ENST00000339865 RFPL4AA6NLU0 287 aa12□□□□□ -0.49
USP47-202ENST00000339865 RFPL4AL1F8VTS6 287 aa12□□□□□ -0.49
USP47-202ENST00000339865 EFSO43281 561 aa12□□□□□ -0.49
USP47-202ENST00000339865 H2AFB1P0C5Y9 115 aa12□□□□□ -0.49
USP47-202ENST00000339865 UBL4AP11441 157 aa12□□□□□ -0.49
USP47-202ENST00000339865 ARNTP27540 789 aa12□□□□□ -0.49
USP47-202ENST00000339865 SELPLGQ14242 412 aa12□□□□□ -0.49
USP47-202ENST00000339865 TMEM182Q6ZP80 229 aaPredicted RBP12□□□□□ -0.49
USP47-202ENST00000339865 SMG9Q9H0W8 520 aaKnown RBP12□□□□□ -0.49
USP47-202ENST00000339865 C20orf85Q9H1P6 137 aa12□□□□□ -0.49
USP47-202ENST00000339865 TRAV34A0A0B4J273 112 aa12□□□□□ -0.49
USP47-202ENST00000339865 WNT7AO00755 349 aa12□□□□□ -0.49
USP47-202ENST00000339865 SDHDO14521 159 aa12□□□□□ -0.49
USP47-202ENST00000339865 DOK2O60496 412 aa12□□□□□ -0.49
USP47-202ENST00000339865 AK1P00568 194 aa12□□□□□ -0.49
USP47-202ENST00000339865 ACRV1P26436 265 aa12□□□□□ -0.49
USP47-202ENST00000339865 CSNK1A1P48729 337 aa12□□□□□ -0.49
USP47-202ENST00000339865 LGALS4P56470 323 aa12□□□□□ -0.49
USP47-202ENST00000339865 SELENOWP63302 87 aa12□□□□□ -0.49
USP47-202ENST00000339865 SLC51BQ86UW2 128 aa12□□□□□ -0.49
USP47-202ENST00000339865 POM121Q96HA1 1249 aa12□□□□□ -0.49
USP47-202ENST00000339865 PBX4Q9BYU1 374 aa12□□□□□ -0.49
USP47-202ENST00000339865 OCEL1Q9H607 264 aa12□□□□□ -0.49
USP47-202ENST00000339865 CEP170Q5SW79 1584 aa12□□□□□ -0.49
USP47-202ENST00000339865 TRAV27A0A087WT01 109 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 OPN1LWP04000 364 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 PGGT1BP53609 377 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 TECRLQ5HYJ1 363 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 SLC35B2Q8TB61 432 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 PIGQQ9BRB3 760 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 HSFX1Q9UBD0 423 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 GABRQQ9UN88 632 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 TMEM184BQ9Y519 407 aaPredicted RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 SULT2B1O00204 365 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 FUT1P19526 365 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 CLDN12P56749 244 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 RNF212Q495C1 297 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 FAM57BQ71RH2 274 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 LFNGQ8NES3 379 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 MUL1Q969V5 352 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 TMEM231Q9H6L2 316 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 EXOSC3Q9NQT5 275 aaKnown RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 UBQLN4Q9NRR5 601 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 UNC13AQ9UPW8 1703 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 HECW2Q9P2P5 1572 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 ETV3P41162 512 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 GPLD1P80108 840 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 PDE7AQ13946 482 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 GRASPQ7Z6J2 395 aaPredicted RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 AMIGO3Q86WK7 504 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 ZNF845Q96IR2 970 aaPredicted RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 RTP3Q9BQQ7 232 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 WNT6Q9Y6F9 365 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 LGALS8O00214 317 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 YIF1AO95070 293 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 RPS5P46782 204 aaKnown RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 CLDN8P56748 225 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 INCA1Q0VD86 236 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 CATSPERDQ86XM0 798 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 OR5AR1Q8NGP9 310 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 FAM124BQ9H5Z6 455 aaPredicted RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 NCBP2LA6PVI3 153 aaKnown RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 GPR37L1O60883 481 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 CEBPDP49716 269 aaPredicted RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 TOR2AQ5JU69 321 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 DHRS7BQ6IAN0 325 aaPredicted RBP11.99□□□□□ -0.49
USP47-202ENST00000339865 OR5M10Q6IEU7 315 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 PRR27Q6MZM9 219 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 MFSD9Q8NBP5 474 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 RHEBL1Q8TAI7 183 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 SLC35B4Q969S0 331 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 TECTBQ96PL2 329 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 ANKRD60Q9BZ19 345 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 ZGRF1Q86YA3 2104 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 OR5K4A6NMS3 321 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 DUX1O43812 170 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 OLFM2O95897 454 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 GABRB3P28472 473 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 CCL11P51671 97 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 CCR6P51684 374 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 KLHDC8AQ8IYD2 350 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 NAGSQ8N159 534 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 ZNF281Q9Y2X9 895 aa11.99□□□□□ -0.49
USP47-202ENST00000339865 C21orf33P30042 268 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 TGFBR3Q03167 851 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ELOCQ15369 112 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 ETFDHQ16134 617 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 SLC35D2Q76EJ3 337 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 APOBEC3GQ9HC16 384 aaKnown RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 GPR34Q9UPC5 381 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 GPR39O43194 453 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 COL13A1Q5TAT6 717 aaPredicted RBP11.98□□□□□ -0.49
USP47-202ENST00000339865 HACD4Q5VWC8 232 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 UNC5DQ6UXZ4 953 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 TMPRSS11FQ6ZWK6 438 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 AK3Q9UIJ7 227 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 TMEM269A0A1B0GVZ9 245 aa11.98□□□□□ -0.49
USP47-202ENST00000339865 TRIM77I1YAP6 450 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms