RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SLC25A43Q8WUT9 341 aaPredicted RBP13.23□□□□□ -0.29
CBX3-201ENST00000337620 SMPDL3BQ92485 455 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 RFKQ969G6 155 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 RASD2Q96D21 266 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 C5orf34Q96MH7 638 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 FN3KQ9H479 309 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 CNOT2Q9NZN8 540 aaKnown RBP13.23□□□□□ -0.29
CBX3-201ENST00000337620 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.23□□□□□ -0.29
CBX3-201ENST00000337620 SLC6A5Q9Y345 797 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 CORINQ9Y5Q5 1042 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 KCNMB2Q9Y691 235 aa13.23□□□□□ -0.29
CBX3-201ENST00000337620 MED12Q93074 2177 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 TEX13CA0A0J9YWL9 993 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 PLPP3O14495 311 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 ARPC3O15145 178 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 FADS2O95864 444 aaKnown RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 PLGP00747 810 aaPredicted RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 ZNF17P17021 662 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 ACVR2AP27037 513 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 MAP2K4P45985 399 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 SLC15A1P46059 708 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 EMX1Q04741 257 aaPredicted RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
CBX3-201ENST00000337620 TMEM44Q2T9K0 475 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 GHDCQ8N2G8 530 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 KDM8Q8N371 416 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 PTP4A1Q93096 173 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 TMIGD2Q96BF3 282 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 Q96M85 177 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 HCAR1Q9BXC0 346 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 RNF32Q9H0A6 362 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 MRPL39Q9NYK5 338 aaKnown RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 GRHPRQ9UBQ7 328 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 KLHL21Q9UJP4 597 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 KLF13Q9Y2Y9 288 aaPredicted RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 IDH3BO43837 385 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 NME2P1O60361 137 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 AKR7A3O95154 331 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 PAICSP22234 425 aaKnown RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 NME2P22392 152 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 ALDH3B2P48448 385 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 OR2B6P58173 313 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 KLHL12Q53G59 568 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 H1FNTQ75WM6 255 aaPredicted RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
CBX3-201ENST00000337620 RNFT2Q96EX2 444 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 OR51V1Q9H2C8 321 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 INIPQ9NRY2 104 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 B4GALT7Q9UBV7 327 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 COMMD3-BMI1R4GMX3 469 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 FREM3P0C091 2139 aa13.22□□□□□ -0.29
CBX3-201ENST00000337620 NCKAP5O14513 1909 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 FRYQ5TBA9 3013 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 KLRC4-KLRK1H3BQV0 150 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.29
CBX3-201ENST00000337620 APOL3O95236 402 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 PIPP12273 146 aaPredicted RBP13.21□□□□□ -0.29
CBX3-201ENST00000337620 PCMT1P22061 227 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 SDHAP31040 664 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 MTNR1AP48039 350 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 CLK1P49759 484 aaKnown RBP13.21□□□□□ -0.29
CBX3-201ENST00000337620 SLC16A1P53985 500 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 PLGLB1Q02325 96 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 TLE3Q04726 772 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 WIPI1Q5MNZ9 446 aaPredicted RBP13.21□□□□□ -0.29
CBX3-201ENST00000337620 XAF1Q6GPH4 301 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 FAM122BQ7Z309 247 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 GID4Q8IVV7 300 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 SVOPQ8N4V2 548 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 LSM14AQ8ND56 463 aaKnown RBP13.21□□□□□ -0.29
CBX3-201ENST00000337620 TSPAN32Q96QS1 320 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 NMNAT3Q96T66 252 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 CHST11Q9NPF2 352 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 ALKBH4Q9NXW9 302 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 ZNF346Q9UL40 294 aaKnown RBP13.21□□□□□ -0.29
CBX3-201ENST00000337620 HDGFL3Q9Y3E1 203 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 SPTBN4Q9H254 2564 aa13.21□□□□□ -0.29
CBX3-201ENST00000337620 FAM166BA8MTA8 275 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 SULT2B1O00204 365 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 CLUP10909 449 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 MEOX1P50221 254 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 B3GALT5-AS1P59052 145 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 RPS7P62081 194 aaKnown RBP13.21□□□□□ -0.3
CBX3-201ENST00000337620 RAC1P63000 192 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 PUDPQ08623 228 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 KLHL22Q53GT1 634 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 ZNF766Q5HY98 468 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 NIPAL3Q6P499 406 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 B3GLCTQ6Y288 498 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 JAZF1Q86VZ6 243 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 SCAIQ8N9R8 606 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 OR9Q1Q8NGQ5 310 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 DTNBP1Q96EV8 351 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 TMEM80Q96HE8 168 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 SFXN2Q96NB2 322 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 SIGLEC11Q96RL6 698 aa13.21□□□□□ -0.3
CBX3-201ENST00000337620 TTTY12Q9BZ98 90 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms