RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ZBP1Q9H171 429 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TMPRSS11EQ9UL52 423 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 A0A0D9SG52 128 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 ZAR1LA6NP61 321 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 PRICKLE3O43900 615 aaPredicted RBP12.73□□□□□ -0.37
RTN4-202ENST00000337526 CHRM4P08173 479 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 SLC35E2P0CK97 266 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 DDOSTP39656 456 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 SLC9A3R2Q15599 337 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 ZNF385BQ569K4 471 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 TCTN3Q6NUS6 607 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 DPY19L2P2Q6ZN68 376 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 RFPL4BQ6ZWI9 263 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 GPR155Q7Z3F1 870 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 MYEOVQ96EZ4 313 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 EHFQ9NZC4 300 aa12.73□□□□□ -0.37
RTN4-202ENST00000337526 SMLR1H3BR10 107 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 HMGN4O00479 90 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 DBHP09172 617 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 PPP3CBP16298 524 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 SERPINA2P20848 420 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 NUDT1P36639 197 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 SLC19A1P41440 591 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ECH1Q13011 328 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 MMP21Q8N119 569 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 SULT1C2O00338 296 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 FBXO24O75426 580 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 TSPAN12O95859 305 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 SBK2P0C263 348 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 TAS2R20P59543 309 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 HTR4Q13639 388 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ABHD17BQ5VST6 288 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 PHOSPHO2Q8TCD6 241 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 WDR76Q9H967 626 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ANKRD33BA6NCL7 494 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ZFAND5O76080 213 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ATG12O94817 140 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ZNF28P17035 718 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 RAB6AP20340 208 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 EPHA1P21709 976 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 RPS27AP62979 156 aaKnown RBP12.72□□□□□ -0.37
RTN4-202ENST00000337526 UBA52P62987 128 aaKnown RBP12.72□□□□□ -0.37
RTN4-202ENST00000337526 DYRK1AQ13627 763 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 TMEM52BQ4KMG9 183 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 C14orf28Q4W4Y0 310 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 MED25Q71SY5 747 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 LIN7BQ9HAP6 207 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 TJP1Q07157 1748 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 FADS1O60427 444 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 CD6P30203 668 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 CCR9P51686 369 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 CAMK2DQ13557 499 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 MRPL58Q14197 206 aaKnown RBP12.72□□□□□ -0.37
RTN4-202ENST00000337526 DUSP5Q16690 384 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 MEP1BQ16820 701 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 EXOSC6Q5RKV6 272 aaKnown RBP12.72□□□□□ -0.37
RTN4-202ENST00000337526 SAXO2Q658L1 398 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 TRAPPC6BQ86SZ2 158 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 C19orf47Q8N9M1 422 aaKnown RBP12.72□□□□□ -0.37
RTN4-202ENST00000337526 OR1S1Q8NH92 325 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 Q96M85 177 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 C1orf198Q9H425 327 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 ATPIF1Q9UII2 106 aa12.72□□□□□ -0.37
RTN4-202ENST00000337526 SLC22A23A1A5C7 686 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 LAMTOR5O43504 91 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 TMPRSS11DO60235 418 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 RAC2P15153 192 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 ALDH3B1P43353 468 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 IDH3GP51553 393 aaPredicted RBP12.71□□□□□ -0.37
RTN4-202ENST00000337526 YIF1BQ5BJH7 314 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 STEAP1BQ6NZ63 245 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 PRR18Q8N4B5 295 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 NINQ8N4C6 2090 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 KRBOX1C9JBD0 128 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 SNAPINO95295 136 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 TRAPPC2P0DI81 140 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 TRAPPC2BP0DI82 140 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 SRMP19623 302 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 EEF1A1P68104 462 aaKnown RBP12.71□□□□□ -0.37
RTN4-202ENST00000337526 ALKBH1Q13686 389 aaKnown RBP12.71□□□□□ -0.37
RTN4-202ENST00000337526 PTOV1Q86YD1 416 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 OR4K15Q8NH41 348 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 MS4A6EQ96DS6 147 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 MICU1Q9BPX6 476 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 SELENOIQ9C0D9 397 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 HINT3Q9NQE9 182 aaKnown RBP12.71□□□□□ -0.37
RTN4-202ENST00000337526 GLTPQ9NZD2 209 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 EMC3Q9P0I2 261 aa12.71□□□□□ -0.37
RTN4-202ENST00000337526 THAP10Q9P2Z0 257 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms