RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 RDH16O75452 317 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 GAREM2Q75VX8 874 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 LRRTM1Q86UE6 522 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 DCUN1D4Q92564 292 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 RSRP1Q9BUV0 290 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 CWH43Q9H720 699 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 ACKR4Q9NPB9 350 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 MARCH5Q9NX47 278 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF223Q9UK11 482 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 CYTIPO60759 359 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 TPT1P13693 172 aaKnown RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 CST5P28325 142 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 EEF1A1P68104 462 aaKnown RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 EEF1A2Q05639 463 aaKnown RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 EEF1A1P5Q5VTE0 462 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF585AQ6P3V2 769 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 OR5AK2Q8NH90 309 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 PAPOLGQ9BWT3 736 aaKnown RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 PIAS3Q9Y6X2 628 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 WNK3Q9BYP7 1800 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 ITGBL1O95965 494 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 AMY2AP04746 511 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 SPI1P17947 270 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 CNR1P21554 472 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 HNRNPA2B1P22626 353 aaKnown RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 PSMB10P40306 273 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 HERV-K104P61576 105 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 CARD17Q5XLA6 110 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 WFDC5Q8TCV5 224 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 PNPLA2Q96AD5 504 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 URM1Q9BTM9 101 aaKnown RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 AUNIPQ9H7T9 357 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 GSN-AS1Q9NRJ2 163 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 A0A0A6YYC8 382 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 A0A0B4J2A0 478 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 I3L1I5 382 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 SEMA4FO95754 770 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 MMP2P08253 660 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 MTNR1BP49286 362 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 MVDP53602 400 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 LTB4RQ15722 352 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 NHLRC1Q6VVB1 395 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 MAMDC2Q7Z304 686 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 PTOV1Q86YD1 416 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 OR5M1Q8NGP8 315 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 LGALS14Q8TCE9 139 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 OR7D2Q96RA2 312 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 TMEM121BQ9BXQ6 578 aaPredicted RBP14.89□□□□□ -0.03
NPHP3-201ENST00000337331 TOLLIPQ9H0E2 274 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 PRO1933Q9H354 126 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 SHPKQ9UHJ6 478 aa14.89□□□□□ -0.03
NPHP3-201ENST00000337331 FAM186AA6NE01 2351 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 CEP290O15078 2479 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 TVP23AA6NH52 213 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ADAM11O75078 769 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 CA3P07451 260 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 PVRP15151 417 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 SLC6A11P48066 632 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 CBFBQ13951 182 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 CCSMST1Q4G0I0 132 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ENTPD8Q5MY95 495 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF619Q8N2I2 560 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 MRPL43Q8N983 215 aaKnown RBP14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ABHD1Q96SE0 405 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 TAS2R8Q9NYW2 309 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 OR6C68A6NDL8 312 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 FOXE1O00358 373 aaPredicted RBP14.88□□□□□ -0.03
NPHP3-201ENST00000337331 SOD1P00441 154 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 PGGHGQ32M88 737 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 TMEM205Q6UW68 189 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF561Q8N587 486 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 SLC25A44Q96H78 314 aaPredicted RBP14.88□□□□□ -0.03
NPHP3-201ENST00000337331 TPSD1Q9BZJ3 242 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 NTMQ9P121 344 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 F11P03951 625 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 DCNP07585 359 aaKnown RBP14.88□□□□□ -0.03
NPHP3-201ENST00000337331 PRSS3P35030 304 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 TPBGQ13641 420 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ALKBH1Q13686 389 aaKnown RBP14.88□□□□□ -0.03
NPHP3-201ENST00000337331 EXOSC7Q15024 291 aaKnown RBP14.88□□□□□ -0.03
NPHP3-201ENST00000337331 RSU1Q15404 277 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 OR10K2Q6IF99 312 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ACSM5Q6NUN0 579 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 CALHM3Q86XJ0 350 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 ZNF687Q8N1G0 1237 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 FGF13Q92913 245 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 C1QTNF2Q9BXJ5 285 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 CHST2Q9Y4C5 530 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 SCN9AQ15858 1988 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 KIF13BQ9NQT8 1826 aa14.88□□□□□ -0.03
NPHP3-201ENST00000337331 DCDC2BA2VCK2 349 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 ACOT7O00154 380 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 FBLP22087 321 aaKnown RBP14.87□□□□□ -0.03
NPHP3-201ENST00000337331 P2RY2P41231 377 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 RAB11BQ15907 218 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 ALG10Q5BKT4 473 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 IL17RCQ8NAC3 791 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 OR52I2Q8NH67 350 aa14.87□□□□□ -0.03
NPHP3-201ENST00000337331 UBTD2Q8WUN7 234 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms