RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ISYNA1Q9NPH2 558 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 SOHLH2Q9NX45 425 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 TAAR2Q9P1P5 351 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF281Q9Y2X9 895 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 KNTC1P50748 2209 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 M0QZQ0 153 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 MPC2O95563 127 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 IGHA2P01877 340 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 SBK2P0C263 348 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 TPGS2Q68CL5 300 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 TRAM1L1Q8N609 369 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 OR1S2Q8NGQ3 325 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 TBC1D20Q96BZ9 403 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 SRMSQ9H3Y6 488 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 PPP1R3EQ9H7J1 279 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 FAM86C1Q9NVL1 165 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 MSRAQ9UJ68 235 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 MRPS33Q9Y291 106 aaKnown RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 INSL5Q9Y5Q6 135 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 EP400Q96L91 3159 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 YY2O15391 372 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 B4GALT2O60909 372 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 SPP1P10451 314 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 DRD2P14416 443 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 TAS2R20P59543 309 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 CYCSP99999 105 aaKnown RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 EXOSC6Q5RKV6 272 aaKnown RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF761Q86XN6 746 aaPredicted RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 OR4D9Q8NGE8 314 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF75AQ96N20 296 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 ACTRT3Q9BYD9 372 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 TINAGL1Q9GZM7 467 aaPredicted RBP12.27□□□□□ -0.45
COL2A1-201ENST00000337299 C11orf49Q9H6J7 331 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 INSL6Q9Y581 213 aa12.27□□□□□ -0.45
COL2A1-201ENST00000337299 TRBV5-3A0A0A0MS03 114 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 SUSD5O60279 629 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 RBMXL2O75526 392 aaKnown RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 HOXD4P09016 255 aaPredicted RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 OR13C7P0DN81 318 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 C2orf27AQ580R0 203 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 TCEAL5Q5H9L2 206 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 RPL22L1Q6P5R6 122 aaKnown RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 CNKSR3Q6P9H4 555 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 CBARPQ8N350 705 aaPredicted RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 HHIPL1Q96JK4 782 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 TAS2R5Q9NYW4 299 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 H7C1C5 153 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 BET1O15155 118 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 PRKAR1BP31321 381 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 LCN6P62502 163 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 C12orf73Q69YU5 71 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 FAM71E1Q6IPT2 247 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 PSRC1Q6PGN9 363 aaPredicted RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 SUMF2Q8NBJ7 301 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 OR4K17Q8NGC6 315 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 PTCHD1Q96NR3 888 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 NMNAT3Q96T66 252 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 GAREM1Q9H706 876 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 MAST2Q6P0Q8 1798 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 H7C417 338 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 YKT6O15498 198 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 CYTIPO60759 359 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 NMBP08949 121 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 GDF7Q7Z4P5 450 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 LRRC25Q8N386 305 aaPredicted RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 RASGEF1AQ8N9B8 481 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 AKR7LQ8NHP1 331 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 ZNF417Q8TAU3 575 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 YIPF5Q969M3 257 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 OR2M4Q96R27 311 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 GLIPR2Q9H4G4 154 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 FGF20Q9NP95 211 aaPredicted RBP12.26□□□□□ -0.45
COL2A1-201ENST00000337299 FBXO4Q9UKT5 387 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 CACNA1IQ9P0X4 2223 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 ARAP2Q8WZ64 1704 aa12.26□□□□□ -0.45
COL2A1-201ENST00000337299 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 HMGN4O00479 90 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 PPP1R2P9O14990 202 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 ADH1CP00326 375 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 GNRH1P01148 92 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SOD2P04179 222 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 CD3DP04234 171 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 EPXP11678 715 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SLC2A5P22732 501 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SDHAP31040 664 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 AKT2P31751 481 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 EIF2S3P41091 472 aaKnown RBP12.25□□□□□ -0.45
COL2A1-201ENST00000337299 OR1Q1Q15612 314 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 LTB4RQ15722 352 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 RNF212Q495C1 297 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 SPIN3Q5JUX0 258 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 LY6G5CQ5SRR4 150 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 OR2W3Q7Z3T1 314 aa12.25□□□□□ -0.45
COL2A1-201ENST00000337299 STPG2Q8N412 459 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms