RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 GDNFP39905 211 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 PPM1FP49593 454 aaPredicted RBP21.33■■□□□ 1
NDEL1-201ENST00000334527 ZNF74Q16587 644 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 CD276Q5ZPR3 534 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 LINGO2Q7L985 606 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 ATG4DQ86TL0 474 aaPredicted RBP21.33■■□□□ 1
NDEL1-201ENST00000334527 ZSCAN1Q8NBB4 408 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 FAM71CQ8NEG0 241 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 PHOSPHO1Q8TCT1 267 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 NANSQ9NR45 359 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 USP34Q70CQ2 3546 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 A0A0C4DFX4 3053 aa21.33■■□□□ 1
NDEL1-201ENST00000334527 IFITM5A6NNB3 132 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 H2AFB2P0C5Z0 115 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 UBL4AP11441 157 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 CAPZBP47756 277 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 SLC22A10Q63ZE4 541 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 RGP1Q92546 391 aaPredicted RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 CLIP3Q96DZ5 547 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 CMTM3Q96MX0 182 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 UBQLN4Q9NRR5 601 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 HIF3AQ9Y2N7 669 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 EYSQ5T1H1 3165 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 EML5Q05BV3 1969 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 ANKRD61A6NGH8 418 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 C17orf105B2RV13 164 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 AIPO00170 330 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 RPP14O95059 124 aaKnown RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 DYRK1AQ13627 763 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 ZNF684Q5T5D7 378 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 FAM199XQ6PEV8 388 aaPredicted RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 CBLN3Q6UW01 205 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 ZNF767PQ75MW2 155 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 FAM122BQ7Z309 247 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 NANOGNBQ7Z5D8 188 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 ZNF687Q8N1G0 1237 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 ZNF527Q8NB42 609 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 LSM14AQ8ND56 463 aaKnown RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 RNF166Q96A37 237 aaPredicted RBP21.32■■□□□ 1
NDEL1-201ENST00000334527 MPDZO75970 2070 aa21.32■■□□□ 1
NDEL1-201ENST00000334527 A0A087WV48 116 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 TSC22D2O75157 780 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 PROS1P07225 676 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 CD14P08571 375 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 ANXA3P12429 323 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 CXCL3P19876 107 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 CTXN1P60606 82 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 SKP2Q13309 424 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 ANGPT1Q15389 498 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 RAB30Q15771 203 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 GSG1Q2KHT4 349 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 ALG10Q5BKT4 473 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 FNDC7Q5VTL7 733 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 LYPD8Q6UX82 237 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 BTN2A1Q7KYR7 527 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 DACT3Q96B18 629 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 ZFP64Q9NPA5 681 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 OR8G3PP0DMU2 310 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 COL13A1Q5TAT6 717 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 Q6ZS52 159 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 SLC16A9Q7RTY1 509 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 TIGD4Q8IY51 512 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 ZNF321PQ8N8H1 164 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 ZNF431Q8TF32 576 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 GIMAP1Q8WWP7 306 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 GCDHQ92947 438 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 CCNL2Q96S94 520 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 TSPAN10Q9H1Z9 355 aaPredicted RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 SOHLH2Q9NX45 425 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 MRPL39Q9NYK5 338 aaKnown RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 MRPL15Q9P015 296 aaKnown RBP21.31■■□□□ 1
NDEL1-201ENST00000334527 SLC23A1Q9UHI7 598 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 MGAT4AQ9UM21 535 aa21.31■■□□□ 1
NDEL1-201ENST00000334527 TMEM72A0PK05 275 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SCDO00767 359 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 IGLV3-19P01714 112 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 F13BP05160 661 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SYPP08247 313 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SLC25A1P53007 311 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 LRRC75AQ8NAA5 344 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SLC25A38Q96DW6 304 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 IRF2BPLQ9H1B7 796 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 RANBP3Q9H6Z4 567 aaPredicted RBP21.3■■□□□ 1
NDEL1-201ENST00000334527 LIN7BQ9HAP6 207 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 MMP25Q9NPA2 562 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 PLCL2Q9UPR0 1127 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 KLHDC2Q9Y2U9 406 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 A0A1W2PPC4 97 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 CHURC1-FNTBB4DL54 471 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 DPP4P27487 766 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SDHAP31040 664 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 FNTBP49356 437 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 CLDN12P56749 244 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SERTAD2Q14140 314 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 SLC6A19Q695T7 634 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 FCRLAQ7L513 359 aa21.3■■□□□ 1
NDEL1-201ENST00000334527 FAM220AQ7Z4H9 259 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms