RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TRAV20A0A0B4J274 112 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 GLOD5A6NK44 160 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ACP5P13686 325 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ITGB8P26012 769 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PTGER4P35408 488 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DHODHQ02127 395 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DOC2BQ14184 412 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CTU2Q2VPK5 515 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CGB2Q6NT52 195 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 MFSD9Q8NBP5 474 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OR4D6Q8NGJ1 314 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OR10Q1Q8NGQ4 319 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 TAAR9Q96RI9 348 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ST6GALNAC5Q9BVH7 336 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 AK3Q9UIJ7 227 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CICQ96RK0 1608 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NPIPB15A6NHN6 443 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SIGLEC6O43699 453 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LIMS3P0CW19 117 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LIMS4P0CW20 117 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 RPL17P18621 184 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CTSOP43234 321 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF154Q13106 437 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SDHAF4Q5VUM1 108 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PLCXD3Q63HM9 321 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NPSR1Q6W5P4 371 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SPATC1Q76KD6 591 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 HSD17B13Q7Z5P4 300 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OR4D10Q8NGI6 311 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 AKR7LQ8NHP1 331 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 C2CD4CQ8TF44 421 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ESAMQ96AP7 390 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 WDFY2Q96P53 400 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ATG101Q9BSB4 218 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CPA4Q9UI42 421 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 A0A1B0GV50 99 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 GPR25O00155 361 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 B4GAT1O43505 415 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SMAD6O43541 496 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ADAMTS4O75173 837 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LMO2P25791 158 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SSTR4P31391 388 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 TP53I3Q53FA7 332 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF684Q5T5D7 378 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DPY19L2P2Q6ZN68 376 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PSMF1Q92530 271 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 WDR92Q96MX6 357 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 TREX1Q9NSU2 369 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 KCMF1Q9P0J7 381 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PIRO00625 290 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CHEK1O14757 476 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SELEP16581 610 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 HNF1BP35680 557 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NBPF12Q5TAG4 269 aaPredicted RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CLEC9AQ6UXN8 241 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 FAM3DQ96BQ1 224 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NTNG2Q96CW9 530 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LMF1Q96S06 567 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 B4GALT6Q9UBX8 382 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SLC9B1P1A6NJY1 282 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DUX1O43812 170 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CXCL14O95715 111 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PTBP3O95758 552 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 RPA2P15927 270 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SEMA3BQ13214 749 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ARSIQ5FYB1 569 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 LRRC73Q5JTD7 316 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PODNL1Q6PEZ8 512 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 BPIFCQ8NFQ6 507 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NENFQ9UMX5 172 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 MT-ATP6P00846 226 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ACSM4P0C7M7 580 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 C8orf89P0DMQ9 161 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DPP4P27487 766 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CSN1S1P47710 185 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CDKN2DP55273 166 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 PPP1CBP62140 327 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 AADACL3Q5VUY0 350 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 NANOGP1Q8N7R0 232 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OR51A4Q8NGJ6 313 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 OR2G3Q8NGZ4 309 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ISG20Q96AZ6 181 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 INTS12Q96CB8 462 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CMBLQ96DG6 245 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SGPP1Q9BX95 441 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 SPACA1Q9HBV2 294 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ZCWPW2A0A1B0GU75 182 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 MYBPHLA2RUH7 354 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ST8SIA3O43173 380 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 HNRNPA1P09651 372 aaKnown RBP eCLIP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 COX5AP20674 150 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 IDUAP35475 653 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DGKZQ13574 1117 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DOC2AQ14183 400 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 GPR18Q14330 331 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 ELAVL3Q14576 367 aaKnown RBP5.14□□□□□ -1.59
PTPRB-202ENST00000334414 DPPA3Q6W0C5 159 aa5.14□□□□□ -1.59
PTPRB-202ENST00000334414 CCDC116Q8IYX3 515 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms