RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 MKL2Q9ULH7 1088 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 CFAP54Q96N23 3096 aa13.53□□□□□ -0.24
CLCNKA-201ENST00000331433 ASCC3Q8N3C0 2202 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 A0A087WV48 116 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 FAM240BA0A1B0GVZ2 78 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 HMX3A6NHT5 357 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 DCTN6O00399 190 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 SERPINA3P01011 423 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 FAM157BP0CG42 384 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 ATF1P18846 271 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 ITPKBP27987 946 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 RPL18Q07020 188 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 MZT2BQ6NZ67 158 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 RPL22L1Q6P5R6 122 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 ASB18Q6ZVZ8 466 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 SDR16C5Q8N3Y7 309 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 TEX19Q8NA77 164 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 OR4D9Q8NGE8 314 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 TAAR8Q969N4 342 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 RELTQ969Z4 430 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 CCNL2Q96S94 520 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 ELF4Q99607 663 aaPredicted RBP13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 MRTO4Q9UKD2 239 aaKnown RBP13.52□□□□□ -0.24
CLCNKA-201ENST00000331433 BCAT2O15382 392 aaPredicted RBP13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 SNRPBP14678 240 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 NPR2P20594 1047 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 SDHAP31040 664 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 UQCRC1P31930 480 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 DDOSTP39656 456 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 MAGEB1P43366 347 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 PLCXD2Q0VAA5 305 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 SF3A2Q15428 464 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 TATDN3Q17R31 274 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 C1QL3Q5VWW1 255 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 HLA-DQA1Q5Y7H0 255 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 LANCL3Q6ZV70 420 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 LIPHQ8WWY8 451 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 UPRTQ96BW1 309 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 CTRCQ99895 268 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 NUDT22Q9BRQ3 303 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 VN1R1Q9GZP7 353 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 LAT2Q9GZY6 243 aa13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 SRA1Q9HD15 236 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-201ENST00000331433 NUDT14O95848 222 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 GIMD1P0DJR0 217 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 GLB1P16278 677 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 RBMS1P29558 406 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 PITPNBP48739 271 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 AFF3P51826 1226 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 STARD6P59095 220 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 NANOS3P60323 173 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 SF3B4Q15427 424 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 CEP78Q5JTW2 689 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 PAMR1Q6UXH9 720 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 NANOGNBQ7Z5D8 188 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC7A6Q92536 515 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 ZC3HAV1LQ96H79 300 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 SLC41A2Q96JW4 573 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 TSPAN32Q96QS1 320 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 ABHD1Q96SE0 405 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 RXFP3Q9NSD7 469 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 CTSFQ9UBX1 484 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 KLHDC2Q9Y2U9 406 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 AK6Q9Y3D8 172 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 TRAV1-2A0A0B4J238 106 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 TMEM72A0PK05 275 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 FLRT2O43155 660 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 FZD7O75084 574 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 UCHL1P09936 223 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 RCVRNP35243 200 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 IFITM2Q01629 132 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 IL10RAQ13651 578 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 ZFP69Q49AA0 526 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 MESTQ5EB52 335 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 SPEM1Q8N4L4 309 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 SCAIQ8N9R8 606 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 DUSP18Q8NEJ0 188 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 HSD17B8Q92506 261 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 DAZLQ92904 295 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 THAP7Q9BT49 309 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 ADAM19Q9H013 955 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 TP63Q9H3D4 680 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 FGF21Q9NSA1 209 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 GRHPRQ9UBQ7 328 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 NPFFR2Q9Y5X5 522 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 CACNA1EQ15878 2313 aa13.51□□□□□ -0.25
CLCNKA-201ENST00000331433 A0A1B0GX78 115 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 TVP23AA6NH52 213 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 NDUFB5O43674 189 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 RPP14O95059 124 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 IGF2P01344 180 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 EPXP11678 715 aa13.5□□□□□ -0.25
CLCNKA-201ENST00000331433 ABCD3P28288 659 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms