RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ADAM29Q9UKF5 820 aa22.33■■□□□ 1.17
SOX1-201ENST00000330949 OR2T7P0C7T2 308 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 PRF1P14222 555 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 DLSTP36957 453 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 EPHB3P54753 998 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 LPCAT3Q6P1A2 487 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 ZSCAN1Q8NBB4 408 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 CYB561A3Q8NBI2 242 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 OR2T27Q8NH04 317 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 UPB1Q9UBR1 384 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 ZNF230Q9UIE0 474 aaPredicted RBP22.33■■□□□ 1.16
SOX1-201ENST00000330949 FBXL4Q9UKA2 621 aa22.33■■□□□ 1.16
SOX1-201ENST00000330949 DENND4CQ5VZ89 1909 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 OR6C76A6NM76 312 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 ABLIM3O94929 683 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 INHAP05111 366 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 GKN3PP0CG01 181 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 CTSAP10619 480 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 MAKP20794 623 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 PNLIPRP2P54317 469 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 TRA2BP62995 288 aaKnown RBP22.32■■□□□ 1.16
SOX1-201ENST00000330949 TEAD2Q15562 447 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 RNF113BQ8IZP6 322 aaKnown RBP22.32■■□□□ 1.16
SOX1-201ENST00000330949 STEAP2Q8NFT2 490 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 PAPOLGQ9BWT3 736 aaKnown RBP22.32■■□□□ 1.16
SOX1-201ENST00000330949 TREM1Q9NP99 234 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 GNG8Q9UK08 70 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 COLCA2A8K830 154 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 F5H0A9 414 aaPredicted RBP22.32■■□□□ 1.16
SOX1-201ENST00000330949 PAPLNO95428 1278 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 GYPBP06028 91 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 FBP1P09467 338 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 DDX6P26196 483 aaKnown RBP eCLIP22.32■■□□□ 1.16
SOX1-201ENST00000330949 ITPKBP27987 946 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 AGERQ15109 404 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 STPG1Q5TH74 334 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 FCRLBQ6BAA4 426 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 THSD4Q6ZMP0 1018 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 ZNF223Q9UK11 482 aaPredicted RBP22.32■■□□□ 1.16
SOX1-201ENST00000330949 LSM7Q9UK45 103 aaKnown RBP22.32■■□□□ 1.16
SOX1-201ENST00000330949 ZNF337Q9Y3M9 751 aa22.32■■□□□ 1.16
SOX1-201ENST00000330949 RNF222A6NCQ9 220 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 OR2AT4A6NND4 320 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 NDUFS4O43181 175 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 FADS1O60427 444 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 PAX6P26367 422 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 PTGER1P34995 402 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 CXADRP78310 365 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 SLC6A19Q695T7 634 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 ENPP7Q6UWV6 458 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 NAA40Q86UY6 237 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 C17orf64Q86WR6 236 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 OR5M8Q8NGP6 311 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 CHST6Q9GZX3 395 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 PRMT8Q9NR22 394 aaPredicted RBP22.31■■□□□ 1.16
SOX1-201ENST00000330949 INSL5Q9Y5Q6 135 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 SLC22A7Q9Y694 548 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 MDC1Q14676 2089 aaKnown RBP22.31■■□□□ 1.16
SOX1-201ENST00000330949 XRCC3O43542 346 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 GTF2F2P13984 249 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 BEX5Q5H9J7 111 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 SGK3Q96BR1 496 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 POFUT1Q9H488 388 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 IL21RQ9HBE5 538 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 UQCC1Q9NVA1 299 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 CCL26Q9Y258 94 aa22.31■■□□□ 1.16
SOX1-201ENST00000330949 TRBV23-1A0A0A0MS06 115 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 ICOSLGO75144 302 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 OR4E1P0C645 316 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 GAS6Q14393 721 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 VWA2Q5GFL6 755 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 CDK20Q8IZL9 346 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 SLITRK2Q9H156 845 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 TCF7L1Q9HCS4 588 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 ERAL1O75616 437 aaKnown RBP22.3■■□□□ 1.16
SOX1-201ENST00000330949 NFYBP25208 207 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 CENPAP49450 140 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 SRSF4Q08170 494 aaKnown RBP22.3■■□□□ 1.16
SOX1-201ENST00000330949 IRF4Q15306 451 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 TAF13Q15543 124 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 SAMD14Q8IZD0 417 aaPredicted RBP22.3■■□□□ 1.16
SOX1-201ENST00000330949 PRSS27Q9BQR3 290 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 CCDC86Q9H6F5 360 aaKnown RBP22.3■■□□□ 1.16
SOX1-201ENST00000330949 GHRLQ9UBU3 117 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 CXCL14O95715 111 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 ABCD3P28288 659 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 DND1Q8IYX4 353 aaKnown RBP22.3■■□□□ 1.16
SOX1-201ENST00000330949 C2orf73Q8N5S3 287 aaPredicted RBP22.3■■□□□ 1.16
SOX1-201ENST00000330949 C20orf141Q9NUB4 165 aa22.3■■□□□ 1.16
SOX1-201ENST00000330949 GGT3PA6NGU5 568 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 Q6ZNB5 142 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 POMGNT2Q8NAT1 580 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 PFN4Q8NHR9 129 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 PAQR8Q8TEZ7 354 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 TMEM239Q8WW34 195 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 ARMC5Q96C12 935 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 IL17FQ96PD4 163 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 CNN2Q99439 309 aaKnown RBP22.29■■□□□ 1.16
SOX1-201ENST00000330949 CLDND1Q9NY35 253 aa22.29■■□□□ 1.16
SOX1-201ENST00000330949 METTL1Q9UBP6 276 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms