RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 PCDHB10Q9UN67 800 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ATP6V1G2-DDX39BF2Z307 99 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 SLC43A1O75387 559 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 BTG2P78543 158 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ZNF582Q96NG8 517 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 WWTR1Q9GZV5 400 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ADAM29Q9UKF5 820 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 SLC6A14Q9UN76 642 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 CEPT1Q9Y6K0 416 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 TTLL8A6PVC2 850 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 TIMM8AO60220 97 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 TPPPO94811 219 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 OPRD1P41143 372 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 GIPRP48546 466 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 MRPL58Q14197 206 aaKnown RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 DUSP7Q16829 419 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 TM9SF4Q92544 642 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 CNOT9Q92600 299 aaKnown RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 TAS2R8Q9NYW2 309 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ZNF223Q9UK11 482 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 A0A0G2JMP0 313 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 AGPAT2O15120 278 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 CRMP1Q14194 572 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 KCNJ8Q15842 424 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 OR4M2Q8NGB6 313 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ATP13A2Q9NQ11 1180 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 A0A0U1RQK1 487 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 E9PI62 339 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 AKR7A3O95154 331 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 PTHP01270 115 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 IGFBP1P08833 259 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 HOXA9P31269 272 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 CD79BP40259 229 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 CAMLGP49069 296 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 C17orf67Q0P5P2 114 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 SLC22A10Q63ZE4 541 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 HBMQ6B0K9 141 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 Q6ZS52 159 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 YRDCQ86U90 279 aaKnown RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 ZNF511Q8NB15 262 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 OR1S1Q8NH92 325 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ARRDC1-AS1Q9H2J1 176 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 PADI1Q9ULC6 663 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 PCYT1BQ9Y5K3 369 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 OR5K3A6NET4 321 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 METTL15A6NJ78 407 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 P2RY10O00398 339 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 BET1O15155 118 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 RFPL3O75679 317 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SEC14L2O76054 403 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TSPAN15O95858 294 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 RFC3P40938 356 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 AFMIDQ63HM1 303 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 GTPBP8Q8N3Z3 284 aaPredicted RBP9.4□□□□□ -0.9
CHD3-201ENST00000330494 CPT1CQ8TCG5 803 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 UBTD2Q8WUN7 234 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 RSPRY1Q96DX4 576 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 NEURL3Q96EH8 262 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 CPNE5Q9HCH3 593 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TNFRSF12AQ9NP84 129 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 HHLA2Q9UM44 414 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 A0A1W2PR48 441 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 PRAMEF27A3QJZ7 478 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 BLACEA4D250 179 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 IFNA10P01566 189 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 IFNA4P05014 189 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 OR8U9P0C7N5 309 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TNFSF4P23510 183 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 PIGAP37287 484 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TGFBR3Q03167 851 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 PRAMEF9Q5VWM5 478 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SGPP2Q8IWX5 399 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 OR5H6Q8NGV6 325 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 FAM174AQ8TBP5 190 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 ZMAT3Q9HA38 289 aaKnown RBP9.4□□□□□ -0.9
CHD3-201ENST00000330494 MMP17Q9ULZ9 603 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 HS3ST3A1Q9Y663 406 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SLC5A10A0PJK1 596 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TMX2-CTNND1H3BSU7 103 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 CTDSP2O14595 271 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 HOXB5P09067 269 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 AKAIN1P0CW23 69 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SHC1P29353 583 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 CNN3Q15417 329 aaKnown RBP9.4□□□□□ -0.9
CHD3-201ENST00000330494 FAM122CQ6P4D5 195 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 DNAJC5GQ8N7S2 189 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 BHLHE23Q8NDY6 225 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 FAM83FQ8NEG4 500 aaPredicted RBP9.4□□□□□ -0.9
CHD3-201ENST00000330494 SYT3Q9BQG1 590 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 MFRPQ9BY79 579 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 DEFB127Q9H1M4 99 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 C1orf198Q9H425 327 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 GFOD1Q9NXC2 390 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TBX21Q9UL17 535 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 SCN3AQ9NY46 2000 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 A0A1B0GX78 115 aa9.4□□□□□ -0.9
CHD3-201ENST00000330494 TRAPPC2LH3BP13 241 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms