RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SPANXN4Q5MJ08 99 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 CDK20Q8IZL9 346 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 OR52E4Q8NGH9 312 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 OR5AK3PQ8NH89 298 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 FBXO27Q8NI29 283 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 FAM110DQ8TAY7 271 aaPredicted RBP12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 CDS1Q92903 461 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 MAELQ96JY0 434 aaKnown RBP12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC35G5Q96KT7 338 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC38A2Q96QD8 506 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 PANX1Q96RD7 426 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF442Q9H7R0 627 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 RMND5AQ9H871 391 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 ZIM2Q9NZV7 527 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF69Q9UC07 566 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 BTNL2Q9UIR0 455 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 GPR45Q9Y5Y3 372 aa12.69□□□□□ -0.38
CTHRC1-201ENST00000330295 ANKRD28O15084 1053 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 PPIHO43447 177 aaKnown RBP12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 ALDOCP09972 364 aaKnown RBP12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 NTF4P34130 210 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 UFM1P61960 85 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 TGFBR3Q03167 851 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 TAF9Q16594 264 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 DCST2Q5T1A1 773 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 OLFML2AQ68BL7 652 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 C11orf87Q6NUJ2 197 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 C16orf62Q7Z3J2 963 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 ANKRD46Q86W74 232 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 CLECL1Q8IZS7 167 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 BCL6BQ8N143 479 aaPredicted RBP12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 MIER2Q8N344 545 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 ARFGAP2Q8N6H7 521 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 NUP37Q8NFH4 326 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 OR4F15Q8NGB8 312 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 OR4F5Q8NH21 305 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 OR4C3Q8NH37 302 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 B4GALNT2Q8NHY0 566 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 RDH5Q92781 318 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 MAGEB18Q96M61 343 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 CCDC115Q96NT0 180 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 OR7D2Q96RA2 312 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 TCF7L2Q9NQB0 619 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF275Q9NSD4 429 aaPredicted RBP12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 GPATCH2Q9NW75 528 aa12.68□□□□□ -0.38
CTHRC1-201ENST00000330295 VSTM5A8MXK1 200 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 GTPBP1O00178 669 aaKnown RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 HPXP02790 462 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 THBS4P35443 961 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 KRTAP10-3P60369 221 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 HPCAP84074 193 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 NAAAQ02083 359 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 POU3F1Q03052 451 aaPredicted RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 PDK3Q15120 406 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF362Q5T0B9 420 aaPredicted RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 CCNJQ5T5M9 372 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 ABLIM2Q6H8Q1 611 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 C16orf87Q6PH81 154 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 EPGNQ6UW88 154 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF621Q6ZSS3 439 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 MTERF4Q7Z6M4 381 aaKnown RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 OTUB1Q96FW1 271 aaPredicted RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 CCDC28BQ9BUN5 200 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 SDR39U1Q9NRG7 319 aaPredicted RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 NUP50Q9UKX7 468 aa12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 GPC6Q9Y625 555 aaPredicted RBP12.67□□□□□ -0.38
CTHRC1-201ENST00000330295 ARHGAP32A7KAX9 2087 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 A0A1W2PQD3 144 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 CCDC154A6NI56 674 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 RFXANKO14593 260 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 MRPL33O75394 65 aaKnown RBP12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 DEAF1O75398 565 aaPredicted RBP12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 STX11O75558 287 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 ANP32DO95626 131 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 KRT75O95678 551 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 MAGEA8P43361 318 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 SELENBP1Q13228 472 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 EXOSC6Q5RKV6 272 aaKnown RBP12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 SAMD5Q5TGI4 173 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 MSANTD1Q6ZTZ1 278 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 MIPOL1Q8TD10 442 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 YIPF5Q969M3 257 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 RAB39BQ96DA2 213 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 NEURL3Q96EH8 262 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 ITCHQ96J02 903 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 ANKRD27Q96NW4 1050 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 OR52B2Q96RD2 323 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 SLC35A5Q9BS91 424 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 SLCO1B3Q9NPD5 702 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 PLEK2Q9NYT0 353 aa12.66□□□□□ -0.38
CTHRC1-201ENST00000330295 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 SCN2BO60939 215 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 SASH3O75995 380 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 CALCRP30988 508 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 IDH3AP50213 366 aa12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 POLR2JP52435 117 aaKnown RBP12.65□□□□□ -0.38
CTHRC1-201ENST00000330295 ATP12AP54707 1039 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms