RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TMEM120BA0PK00 339 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 UBDO15205 165 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 SLC43A1O75387 559 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 PDE5AO76074 875 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 OR4A8P0C604 315 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 HOXB1P14653 301 aaPredicted RBP20.31■□□□□ 0.84
TMEM54-201ENST00000329151 RPS5P46782 204 aaKnown RBP20.31■□□□□ 0.84
TMEM54-201ENST00000329151 CAPZA2P47755 286 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 POLR2JP52435 117 aaKnown RBP20.31■□□□□ 0.84
TMEM54-201ENST00000329151 CLDN17P56750 224 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 TUBA1BP68363 451 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 TUBA4AP68366 448 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 ROR2Q01974 943 aaKnown RBP20.31■□□□□ 0.84
TMEM54-201ENST00000329151 TUBA1AQ71U36 451 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 LSRQ86X29 649 aaPredicted RBP20.31■□□□□ 0.84
TMEM54-201ENST00000329151 MIER2Q8N344 545 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 TMBIM4Q9HC24 238 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 ARGLU1Q9NWB6 273 aaPredicted RBP20.31■□□□□ 0.84
TMEM54-201ENST00000329151 SELENONQ9NZV5 590 aa20.31■□□□□ 0.84
TMEM54-201ENST00000329151 ARPC4-TTLL3A0A0A6YYG9 625 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 PNMTP11086 282 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 PRG2P13727 222 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 NR4A2P43354 598 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 NAAAQ02083 359 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 LGALS3BPQ08380 585 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 ANKS4BQ8N8V4 417 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 BBS10Q8TAM1 723 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 RNF217Q8TC41 542 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 MAGEE2Q8TD90 523 aaPredicted RBP20.3■□□□□ 0.84
TMEM54-201ENST00000329151 BCL2L2Q92843 193 aaPredicted RBP20.3■□□□□ 0.84
TMEM54-201ENST00000329151 BOD1Q96IK1 185 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 LINC00470Q9BZP3 86 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 SLC6A13Q9NSD5 602 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 RCE1Q9Y256 329 aa20.3■□□□□ 0.84
TMEM54-201ENST00000329151 CUBNO60494 3623 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 NR5A2O00482 541 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 AIM2O14862 343 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 OR2T1O43869 369 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 UPK3AO75631 287 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 CECR9P0C854 216 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 STX1BP61266 288 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 NCALDP61601 193 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 MAPK11Q15759 364 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 MST1LQ2TV78 715 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 C3orf36Q3SXR2 165 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 C5orf46Q6UWT4 87 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 EPHX4Q8IUS5 362 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 KDM8Q8N371 416 aa20.29■□□□□ 0.84
TMEM54-201ENST00000329151 TMEM229AB2RXF0 380 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 SNNO75324 88 aaPredicted RBP20.28■□□□□ 0.84
TMEM54-201ENST00000329151 P2RY4P51582 365 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 MVDP53602 400 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 MAGOHP61326 146 aaKnown RBP20.28■□□□□ 0.84
TMEM54-201ENST00000329151 NPRL3Q12980 569 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 GTDC1Q4AE62 458 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 GOLGA6L1Q8N7Z2 621 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 PIK3C3Q8NEB9 887 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 SLC38A4Q969I6 547 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 SLC35B4Q969S0 331 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 VPS33AQ96AX1 596 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 TLCD1Q96CP7 247 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 ANKRD27Q96NW4 1050 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 FOXN4Q96NZ1 517 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 OXGR1Q96P68 337 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 DYNLRB1Q9NP97 96 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 SDR39U1Q9NRG7 319 aaPredicted RBP20.28■□□□□ 0.84
TMEM54-201ENST00000329151 SLC13A4Q9UKG4 626 aa20.28■□□□□ 0.84
TMEM54-201ENST00000329151 NPIPB7O75200 414 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 H2AFXP16104 143 aaPredicted RBP20.27■□□□□ 0.84
TMEM54-201ENST00000329151 PPOXP50336 477 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 IDH3GP51553 393 aaPredicted RBP20.27■□□□□ 0.84
TMEM54-201ENST00000329151 WDR4P57081 412 aaKnown RBP20.27■□□□□ 0.84
TMEM54-201ENST00000329151 ARF1P84077 181 aaKnown RBP20.27■□□□□ 0.84
TMEM54-201ENST00000329151 HOXC5Q00444 222 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 FADDQ13158 208 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 ADIPOQQ15848 244 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 SLC9B1Q4ZJI4 515 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 KRT73Q86Y46 540 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 ANKK1Q8NFD2 765 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 SPATA5L1Q9BVQ7 753 aa20.27■□□□□ 0.84
TMEM54-201ENST00000329151 CRNNQ9UBG3 495 aaPredicted RBP20.27■□□□□ 0.84
TMEM54-201ENST00000329151 VWC2LB2RUY7 222 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 hCG_2039718K7EN88 272 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 CLIC1O00299 241 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 TGFAP01135 160 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 NQO1P15559 274 aaKnown RBP20.26■□□□□ 0.83
TMEM54-201ENST00000329151 NPR2P20594 1047 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 ARR3P36575 388 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 RGNQ15493 299 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 EFNB3Q15768 340 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 FAM69AQ5T7M9 428 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 SPATA21Q7Z572 469 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 ARIH2OSQ8N7S6 290 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 FAM169BQ8N8A8 192 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 KTI12Q96EK9 354 aaPredicted RBP20.26■□□□□ 0.83
TMEM54-201ENST00000329151 MAELQ96JY0 434 aaKnown RBP20.26■□□□□ 0.83
TMEM54-201ENST00000329151 C12orf10Q9HB07 376 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 A4GALTQ9NPC4 353 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 B3GAT2Q9NPZ5 323 aa20.26■□□□□ 0.83
TMEM54-201ENST00000329151 USP22Q9UPT9 525 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms