RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GKN3PP0CG01 181 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 CSNK2A2P19784 350 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 SLC9A5Q14940 896 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 OR1Q1Q15612 314 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 TSC22D1Q15714 1073 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 SLC6A19Q695T7 634 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 STAC2Q6ZMT1 411 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 MAMSTRQ6ZN01 415 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 RANBP3LQ86VV4 465 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 DCUN1D3Q8IWE4 304 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 BEST3Q8N1M1 668 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 CDS1Q92903 461 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 LINC00615Q96LM1 132 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 PTDSS2Q9BVG9 487 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 ALX4Q9H161 411 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 C6orf106Q9H6K1 298 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 MTHFD2LQ9H903 347 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 SYNPO2LQ9H987 977 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 MEPEQ9NQ76 525 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 ZNF281Q9Y2X9 895 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 TBC1D3EA0A087X179 549 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 C17orf113A0A1B0GUU1 675 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 OR5H14A6NHG9 310 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 TMEM200CA6NKL6 621 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 XRCC3O43542 346 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 HEXAP06865 529 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 NANOS3P60323 173 aaKnown RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 CSNK1G2P78368 415 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 BLOC1S1P78537 153 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 SRSF3P84103 164 aaKnown RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 GGTLC2Q14390 218 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 BEX5Q5H9J7 111 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 H3F3CQ6NXT2 135 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 RBMS3Q6XE24 437 aaKnown RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 TMCO2Q7Z6W1 182 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 NRSN1Q8IZ57 195 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 OR2L2Q8NH16 312 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 ADAMTS15Q8TE58 950 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
CCDC60-201ENST00000327554 MACROD1Q9BQ69 325 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 POFUT1Q9H488 388 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 EXO5Q9H790 373 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 LRFN2Q9ULH4 789 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 WDR45Q9Y484 360 aa11.71□□□□□ -0.53
CCDC60-201ENST00000327554 GOLGA4Q13439 2230 aaKnown RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 A0A1B0GTI1 187 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 FGF16O43320 207 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 RAD1O60671 282 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 EIF1BO60739 113 aaKnown RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 CLEC3AO75596 197 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 ZFPL1O95159 310 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 ITGB2P05107 769 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 SLC25A4P12235 298 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 CSRP1P21291 193 aaKnown RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 MPIP34949 423 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 EIF1P41567 113 aaKnown RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 ST8SIA6P61647 398 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 SRSF4Q08170 494 aaKnown RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 TEAD2Q15562 447 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 FAM111BQ6SJ93 734 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF813Q6ZN06 617 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 POMGNT2Q8NAT1 580 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 STEAP2Q8NFT2 490 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 SLC22A8Q8TCC7 542 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 DTD2Q96FN9 168 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 MENTQ9BUN1 341 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 PITHD1Q9GZP4 211 aaPredicted RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 PRSS16Q9NQE7 514 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 TAS2R8Q9NYW2 309 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 OR14I1A6ND48 311 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 PMS2P2O95744 297 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 OR4E1P0C645 316 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 AKAIN1P0CW23 69 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 GTF2F2P13984 249 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 CSF2RBP32927 897 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 GPR143P51810 404 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 PNLIPRP2P54317 469 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 LTBQ06643 244 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 PDZK1IP1Q13113 114 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 FHL1Q13642 323 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 GAS6Q14393 721 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 YOD1Q5VVQ6 348 aaPredicted RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 SLC48A1Q6P1K1 146 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM71Q6P5X7 295 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 CDK20Q8IZL9 346 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 OTUB2Q96DC9 234 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF681Q96N22 645 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 TNFRSF13CQ96RJ3 184 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 TSPAN10Q9H1Z9 355 aaPredicted RBP11.7□□□□□ -0.54
CCDC60-201ENST00000327554 PRDM7Q9NQW5 492 aa11.7□□□□□ -0.54
CCDC60-201ENST00000327554 SYNDIG1LA6NDD5 238 aa11.69□□□□□ -0.54
CCDC60-201ENST00000327554 HIST1H1TP22492 207 aaPredicted RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 SNRPEP62304 92 aaKnown RBP11.69□□□□□ -0.54
CCDC60-201ENST00000327554 HABP2Q14520 560 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms