RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	DNAAF1	Q8NEP3	725 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	TMEM106A	Q96A25	262 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	THAP7	Q9BT49	309 aa	Predicted RBP	10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	DUSP23	Q9BVJ7	150 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	GABARAPL1	Q9H0R8	117 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF224	Q9NZL3	707 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MEN1	O00255	615 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MRPS14	O60783	128 aa	Known RBP	10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	AKR7A3	O95154	331 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MT-ND4	P03905	459 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SYP	P08247	313 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	CD14	P08571	375 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	GZMM	P51124	257 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF81	P51508	661 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SNRPG	P62308	76 aa	Known RBP	10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	EEF1A1	P68104	462 aa	Known RBP	10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MEP1B	Q16820	701 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	LINC00696	Q6ZRV3	163 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	P4HA3	Q7Z4N8	544 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SLC35F3	Q8IY50	421 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	LRRC18	Q8N456	261 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SMRP1	Q8NCR6	262 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	NAT6	Q93015	286 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	ITPKC	Q96DU7	683 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MICU1	Q9BPX6	476 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	NOX4	Q9NPH5	578 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	ACOXL	Q9NUZ1	547 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MTCH2	Q9Y6C9	303 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	VWA8	A3KMH1	1905 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	TMEM269	A0A1B0GVZ9	245 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SLC19A2	O60779	497 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	IGHV3-9	P01782	118 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	YES1	P07947	543 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	GIF	P27352	417 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	ART1	P52961	327 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	PCBP3	P57721	371 aa	Known RBP	10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SLC25A24	Q6NUK1	477 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	SLITRK4	Q8IW52	837 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	OR5D18	Q8NGL1	313 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	DYNC2LI1	Q8TCX1	351 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	TTYH1	Q9H313	450 aa	Predicted RBP	10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	MCCC2	Q9HCC0	563 aa		10.86	□□□□□ -0.67
DDR1-223	ENST00000324771	GABRA5	P31644	462 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	FRK	P42685	505 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	SLC6A8	P48029	635 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	MRPL19	P49406	292 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	FABP5	Q01469	135 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	GUSBP11	Q6P575	273 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	THSD4	Q6ZMP0	1018 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	CCDC71	Q8IV32	467 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	PNLDC1	Q8NA58	520 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	GPR148	Q8TDV2	347 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF431	Q8TF32	576 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	VWCE	Q96DN2	955 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	GALNT9	Q9HCQ5	603 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF701	Q9NV72	531 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF639	Q9UID6	485 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF346	Q9UL40	294 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	COL6A6	A6NMZ7	2263 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	SYT7	O43581	403 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	BRINP1	O60477	761 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	PIAS2	O75928	621 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	TCN2	P20062	427 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	STOM	P27105	288 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	RFC3	P40938	356 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	FOLR3	P41439	243 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	PITPNB	P48739	271 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	OR10A3	P58181	314 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	CCDC28A	Q8IWP9	274 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	SPEM1	Q8N4L4	309 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	OR8D4	Q8NGM9	314 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF417	Q8TAU3	575 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	SLC25A44	Q96H78	314 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	TRPV4	Q9HBA0	871 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	MED29	Q9NX70	200 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	KLHL13	Q9P2N7	655 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	MEIOC	A2RUB1	952 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	C4orf51	C9J302	202 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	IL1A	P01583	271 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	XKRX	Q6PP77	449 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	QSOX2	Q6ZRP7	698 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	STAC	Q99469	402 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	GPA33	Q99795	319 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	BCL7B	Q9BQE9	202 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	FKBP14	Q9NWM8	211 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	PLEK2	Q9NYT0	353 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	GSKIP	Q9P0R6	139 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	NOX1	Q9Y5S8	564 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	NPFFR2	Q9Y5X5	522 aa		10.85	□□□□□ -0.67
DDR1-223	ENST00000324771	CACNA1D	Q01668	2161 aa		10.84	□□□□□ -0.67
DDR1-223	ENST00000324771		A0A1B0GW55	424 aa		10.84	□□□□□ -0.67
DDR1-223	ENST00000324771	GCM2	O75603	506 aa	Predicted RBP	10.84	□□□□□ -0.67
DDR1-223	ENST00000324771	MPIG6B	O95866	241 aa		10.84	□□□□□ -0.67
DDR1-223	ENST00000324771	DUX4L2	P0CJ85	424 aa		10.84	□□□□□ -0.67
DDR1-223	ENST00000324771	DUX4L3	P0CJ86	424 aa		10.84	□□□□□ -0.67
DDR1-223	ENST00000324771	DUX4L4	P0CJ87	422 aa		10.84	□□□□□ -0.67
DDR1-223	ENST00000324771	DUX4L5	P0CJ88	424 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms