RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 NOX3Q9HBY0 568 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 BCL2L10Q9HD36 194 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 TCF7L2Q9NQB0 619 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 VAPAQ9P0L0 249 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 KLHL14Q9P2G3 628 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 RASD1Q9Y272 281 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 ARPC4-TTLL3A0A0A6YYG9 625 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 TMEM247A6NEH6 219 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 A8MV72 311 aaPredicted RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 C5orf58C9J3I9 102 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 ZNF432O94892 652 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 HPRP00739 348 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 IGHV4-31P0DP07 118 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 SLC25A16P16260 332 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 GRPRP30550 384 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 MRPL19P49406 292 aaKnown RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 UBE2NP61088 152 aaKnown RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 VLDLRP98155 873 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 NAAAQ02083 359 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 LOXL1Q08397 574 aaPredicted RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 RAB35Q15286 201 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 SWI5Q1ZZU3 235 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 PHYHD1Q5SRE7 291 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 HMBOX1Q6NT76 420 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 VHLLQ6RSH7 139 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 IL17RELQ6ZVW7 336 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 ABHD12BQ7Z5M8 362 aaPredicted RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 HIPK1Q86Z02 1210 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 PHC2Q8IXK0 858 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 TMEM123Q8N131 208 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 MFSD8Q8NHS3 518 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 BCL2L2Q92843 193 aaPredicted RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 TAAR8Q969N4 342 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 SPDL1Q96EA4 605 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 C7orf26Q96N11 449 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 OR2M2Q96R28 347 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 TNFRSF13CQ96RJ3 184 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 CPPED1Q9BRF8 314 aaPredicted RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 KATNB1Q9BVA0 655 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 REPIN1Q9BWE0 567 aaKnown RBP10.74□□□□□ -0.69
TPM3-204ENST00000323144 SLC52A3Q9NQ40 469 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 CA10Q9NS85 328 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 CCDC167Q9P0B6 97 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 RCE1Q9Y256 329 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 IFT52Q9Y366 437 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 MALRD1Q5VYJ5 2156 aa10.74□□□□□ -0.69
TPM3-204ENST00000323144 COL6A5A8TX70 2615 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 LRRN3E7EW58 273 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 IGLV1-44P01699 117 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 PRKAR1BP31321 381 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 APOBEC3AP31941 199 aaPredicted RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 IDH3AP50213 366 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 IDH3GP51553 393 aaPredicted RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 EFNA4P52798 201 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 SNRPD2P62316 118 aaKnown RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 ARF1P84077 181 aaKnown RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 IL1RL1Q01638 556 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 GGTLC2Q14390 218 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 ADIPOQQ15848 244 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 TTMPQ5BVD1 217 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 ALG10BQ5I7T1 473 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 DHRS4L2Q6PKH6 230 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 BLOC1S3Q6QNY0 202 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 SLC46A3Q7Z3Q1 461 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 BOD1Q96IK1 185 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 LINC00470Q9BZP3 86 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 RAD21L1Q9H4I0 556 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 PIF1Q9H611 641 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 OBP2BQ9NPH6 170 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 TMEM45AQ9NWC5 275 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 THUMPD1Q9NXG2 353 aaKnown RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 CRNNQ9UBG3 495 aaPredicted RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 RPS6KB2Q9UBS0 482 aa10.73□□□□□ -0.69
TPM3-204ENST00000323144 TESQ9UGI8 421 aaKnown RBP10.73□□□□□ -0.69
TPM3-204ENST00000323144 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 IGHV4-61A0A0C4DH41 118 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 VWC2LB2RUY7 222 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 M0R3H8 397 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 AIM2O14862 343 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 VAMP5O95183 116 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 OPN1SWP03999 348 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 CSF3P09919 207 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 HLA-DOBP13765 273 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 ETS2P15036 469 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 IGFBP5P24593 272 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 AQP5P55064 265 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 SH3BGRP55822 239 aaPredicted RBP10.72□□□□□ -0.69
TPM3-204ENST00000323144 RGS8P57771 180 aaPredicted RBP10.72□□□□□ -0.69
TPM3-204ENST00000323144 DSCR9P59020 149 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 NCALDP61601 193 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 CDK6Q00534 326 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 POU3F1Q03052 451 aaPredicted RBP10.72□□□□□ -0.69
TPM3-204ENST00000323144 CHRNB3Q05901 458 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 NPRL3Q12980 569 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 SCARB2Q14108 478 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 SELPLGQ14242 412 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 CARTPTQ16568 116 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 ZSWIM7Q19AV6 140 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 CEACAM16Q2WEN9 425 aa10.72□□□□□ -0.69
TPM3-204ENST00000323144 CHRFAM7AQ494W8 412 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms