RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 IER3IP1Q9Y5U9 82 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 ATG2BQ96BY7 2078 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 HIDE1A8MVS5 230 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 H7C2Y5 167 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 RPP14O95059 124 aaKnown RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 CXCL14O95715 111 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 AK4P27144 223 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 CDK3Q00526 305 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 FNDC3BQ53EP0 1204 aaKnown RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 TRMT12Q53H54 448 aaKnown RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 ERN2Q76MJ5 926 aaKnown RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 TMEM17Q86X19 198 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 OR2L13Q8N349 312 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 BOLLQ8N9W6 283 aaKnown RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 KCT2Q8NC54 265 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 ZNRF4Q8WWF5 429 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 NSMAFQ92636 917 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 NXPE3Q969Y0 559 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 PBX4Q9BYU1 374 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 MLXQ9UH92 298 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 MOKQ9UQ07 419 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 SPTBP11277 2137 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 GNB5O14775 395 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 MAPK3P27361 379 aaPredicted RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 ID2Q02363 134 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 FGL1Q08830 312 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 STAC2Q6ZMT1 411 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 TMPRSS12Q86WS5 348 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 COX18Q8N8Q8 333 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 OR14A16Q8NHC5 309 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 STK35Q8TDR2 534 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 OR8D1Q8WZ84 308 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 RGP1Q92546 391 aaPredicted RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 PTCHD1Q96NR3 888 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 IL21RQ9HBE5 538 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 PURGQ9UJV8 347 aaKnown RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 MAFFQ9ULX9 164 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 SZT2Q5T011 3432 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 TMEM272A0A1B0GTI8 110 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 GXYLT2A0PJZ3 443 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 MEIS3P1A6NDR6 274 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 CTNSO60931 367 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 RNGTTO60942 597 aaKnown RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 FGF18O76093 207 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 GLSO94925 669 aaPredicted RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 CD1AP06126 327 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 ZNF546Q86UE3 836 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 DND1Q8IYX4 353 aaKnown RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 OR51S1Q8NGJ8 323 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 MRPL48Q96GC5 212 aaKnown RBP16.39■□□□□ 0.21
PRKCB-202ENST00000321728 ICAM5Q9UMF0 924 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 ADAM18Q9Y3Q7 739 aa16.39■□□□□ 0.21
PRKCB-202ENST00000321728 IMPA2O14732 288 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 MAOBP27338 520 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 PLA2G7Q13093 441 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 YOD1Q5VVQ6 348 aaPredicted RBP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 KRT77Q7Z794 578 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 DUSP19Q8WTR2 217 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 C10orf90Q96M02 699 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 MRI1Q9BV20 369 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 DNTTIP1Q9H147 329 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 EXO5Q9H790 373 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 OR52A4PA6NMU1 304 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 UBBP0CG47 229 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 UBCP0CG48 685 aaKnown RBP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 GTF2F2P13984 249 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 RPL4P36578 427 aaKnown RBP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 RPS27AP62979 156 aaKnown RBP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 UBA52P62987 128 aaKnown RBP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 LTBQ06643 244 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 PLPP4Q5VZY2 271 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 OR2L3Q8NG85 312 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 OR4K14Q8NGD5 310 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 OR8S1Q8NH09 359 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 NMNAT3Q96T66 252 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 CHST6Q9GZX3 395 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 TMEM185BQ9H7F4 350 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 PRDM9Q9NQV7 894 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 RASL12Q9NYN1 266 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 ACTR10Q9NZ32 417 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 CHRNA9Q9UGM1 479 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 KCNK6Q9Y257 313 aa16.38■□□□□ 0.21
PRKCB-202ENST00000321728 KLF2Q9Y5W3 355 aaPredicted RBP16.38■□□□□ 0.21
PRKCB-202ENST00000321728 A0A1B0GTQ1 180 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 FAM171A2A8MVW0 826 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 H7C417 338 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 NGFRP08138 427 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 MGMTP16455 207 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 DIO1P49895 249 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 EIF2B5Q13144 721 aaKnown RBP16.37■□□□□ 0.21
PRKCB-202ENST00000321728 ADAMTSL4Q6UY14 1074 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 TMEM185AQ8NFB2 350 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 PXYLP1Q8TE99 480 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 LRRC3BQ96PB8 259 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 C12orf57Q99622 126 aa16.37■□□□□ 0.21
PRKCB-202ENST00000321728 USB1Q9BQ65 265 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms