RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ZNF354AO60765 605 aaPredicted RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 CPNE3O75131 537 aaKnown RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 SLC25A12O75746 678 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 APOA1P02647 267 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ANKRD34CP0C6C1 535 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 IL7P13232 177 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 PGCP20142 388 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 GALP22466 123 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 LCN1P31025 176 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SDHAP31040 664 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NRG3P56975 720 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 LCN6P62502 163 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 CDC20Q12834 499 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 SQSTM1Q13501 440 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ISXQ2M1V0 245 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 GLYR1Q49A26 553 aaPredicted RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 LCN1P1Q5VSP4 162 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 AGAP7PQ5VUJ5 663 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 CCBE1Q6UXH8 406 aaPredicted RBP6.88□□□□□ -1.31
IFT88-201ENST00000319980 FAM122BQ7Z309 247 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ANKRD37Q7Z713 158 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 PPP1R3BQ86XI6 285 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ZNF441Q8N8Z8 693 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ZNF511Q8NB15 262 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 OR13C5Q8NGS8 318 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 LIPHQ8WWY8 451 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 PELI1Q96FA3 418 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 CTRCQ99895 268 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ATF6BQ99941 703 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 ALG12Q9BV10 488 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NMNAT2Q9BZQ4 307 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 RNF32Q9H0A6 362 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 C12orf49Q9H741 205 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 MALT1Q9UDY8 824 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 NPFFR2Q9Y5X5 522 aa6.88□□□□□ -1.31
IFT88-201ENST00000319980 DCTN6O00399 190 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 CDC40O60508 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
IFT88-201ENST00000319980 ALOX12BO75342 701 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 IGF2P01344 180 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 GP1BBP13224 206 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 KRR1Q13601 381 aaKnown RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 CBFBQ13951 182 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 GGTLC2Q14390 218 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 QPRTQ15274 297 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 TAB1Q15750 504 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ACSM3Q53FZ2 586 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 PYDC2Q56P42 97 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 IDNKQ5T6J7 187 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 DMKNQ6E0U4 476 aaPredicted RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 WDR5BQ86VZ2 330 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 LRRC75AQ8NAA5 344 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 PGLYRP3Q96LB9 341 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 AKIRIN1Q9H9L7 192 aaPredicted RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 OCIAD1Q9NX40 245 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 TBC1D24Q9ULP9 559 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 COPS3Q9UNS2 423 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 OR6C70A6NIJ9 312 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 C11orf98E9PRG8 122 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 FADS1O60427 444 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 GLCEO94923 617 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 GAAP10253 952 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ATF4P18848 351 aaPredicted RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 AHCYP23526 432 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 UQCRC1P31930 480 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 P2RX1P51575 399 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 GBX2P52951 348 aaPredicted RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 EMP2P54851 167 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 FBXW4P57775 412 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ACTA2P62736 377 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ACTG2P63267 376 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 SIRPAP78324 504 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 SIGLEC14Q08ET2 396 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.87□□□□□ -1.31
IFT88-201ENST00000319980 SLC35D3Q5M8T2 416 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 LINC01590Q5TEZ4 76 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 FAM69BQ5VUD6 431 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 LCN10Q6JVE6 187 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 CNIH2Q6PI25 160 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 PAPD4Q6PIY7 484 aaKnown RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 XKRXQ6PP77 449 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 NRARPQ7Z6K4 114 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 FAM181AQ8N9Y4 354 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 IFI44Q8TCB0 444 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 THAP4Q8WY91 577 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 NAT6Q93015 286 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 C8orf44Q96CB5 159 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 TMCO6Q96DC7 493 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 C12orf10Q9HB07 376 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 ACOXLQ9NUZ1 547 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 FER1L5A0AVI2 2057 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 A0A1W2PQ09 198 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 PROB1E7EW31 1015 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 SUSD5O60279 629 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 PLGP00747 810 aaPredicted RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 APEHP13798 732 aaKnown RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 APEX1P27695 318 aaKnown RBP6.87□□□□□ -1.31
IFT88-201ENST00000319980 PSMB10P40306 273 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 MTNR1BP49286 362 aa6.87□□□□□ -1.31
IFT88-201ENST00000319980 OR10A3P58181 314 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms