RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 GFRA1P56159 465 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
HNF4A-202ENST00000316673 TOMM34Q15785 309 aaPredicted RBP13.88□□□□□ -0.19
HNF4A-202ENST00000316673 OCLNQ16625 522 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 C1orf140Q5VVS0 124 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 TMEM236Q5W0B7 351 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 GFRALQ6UXV0 394 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 DPY19L2P2Q6ZN68 376 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 NANOGNBQ7Z5D8 188 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 ADGRG3Q86Y34 549 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 KIF18BQ86Y91 864 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 FAM26EQ8N5C1 309 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 OR13C2Q8NGS9 318 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 CNIH3Q8TBE1 160 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 FN3KQ9H479 309 aa13.88□□□□□ -0.19
HNF4A-202ENST00000316673 H2AFY2Q9P0M6 372 aaPredicted RBP13.88□□□□□ -0.19
HNF4A-202ENST00000316673 RPH3AQ9Y2J0 694 aaPredicted RBP13.88□□□□□ -0.19
HNF4A-202ENST00000316673 RPL36Q9Y3U8 105 aaKnown RBP13.88□□□□□ -0.19
HNF4A-202ENST00000316673 EFCAB10A6NFE3 127 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 RIIAD1A6NNX1 92 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 PTP4A3O75365 173 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 C1QL1O75973 258 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 CCNA2P20248 432 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 NR1H2P55055 460 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 SF3B4Q15427 424 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■■□ 19.7
HNF4A-202ENST00000316673 BCL2A1Q16548 175 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 CTU2Q2VPK5 515 aaKnown RBP13.87□□□□□ -0.19
HNF4A-202ENST00000316673 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 Q6ZPB1 254 aaPredicted RBP13.87□□□□□ -0.19
HNF4A-202ENST00000316673 LNX2Q8N448 690 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 SVOPQ8N4V2 548 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 GALNT11Q8NCW6 608 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 ZNF540Q8NDQ6 660 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TMEM163Q8TC26 289 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 ABTB1Q969K4 478 aaPredicted RBP13.87□□□□□ -0.19
HNF4A-202ENST00000316673 SLC6A15Q9H2J7 730 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 KLHL21Q9UJP4 597 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 HIF3AQ9Y2N7 669 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 CFAP46Q8IYW2 2715 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 NCKAP5O14513 1909 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 IGKV1D-42A0A075B6H8 117 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 OR2M5A3KFT3 312 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 NTN1O95631 604 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TFPIP10646 304 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 PEPDP12955 493 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 ZNF3P17036 446 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 PTNP21246 168 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 PTGS2P35354 604 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 RPS5P46782 204 aaKnown RBP13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TLE1Q04724 770 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 FOXF1Q12946 379 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TMEM201Q5SNT2 666 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 VASNQ6EMK4 673 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 ATCAYQ86WG3 371 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 GID4Q8IVV7 300 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 PM20D2Q8IYS1 436 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TCEANCQ8N8B7 351 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 SCAIQ8N9R8 606 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 MFSD8Q8NHS3 518 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 PLA2G12AQ9BZM1 189 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 ZNF226Q9NYT6 803 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 CNOT2Q9NZN8 540 aaKnown RBP13.87□□□□□ -0.19
HNF4A-202ENST00000316673 NDUFA13Q9P0J0 144 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.87□□□□□ -0.19
HNF4A-202ENST00000316673 HDGFL3Q9Y3E1 203 aa13.87□□□□□ -0.19
HNF4A-202ENST00000316673 TRAV27A0A087WT01 109 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 A0A1B0GTH9 108 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 TMEM72A0PK05 275 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 IMPA2O14732 288 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 TLX2O43763 284 aaPredicted RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 NPIPB7O75200 414 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 APEHP13798 732 aaKnown RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 FMO3P31513 532 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 IDUAP35475 653 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 RPL5P46777 297 aaKnown RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 B3GALT5-AS1P59052 145 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 RPS4XP62701 263 aaKnown RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 RAC1P63000 192 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 EGR4Q05215 589 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 ALG10Q5BKT4 473 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 EMC4Q5J8M3 183 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 SLC46A3Q7Z3Q1 461 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 MEX3DQ86XN8 651 aaKnown RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 CCDC71Q8IV32 467 aaPredicted RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 IQCF1Q8N6M8 205 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 OR5J2Q8NH18 312 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 MIB2Q96AX9 1013 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 KTI12Q96EK9 354 aaPredicted RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 TNFRSF13CQ96RJ3 184 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 GPX7Q96SL4 187 aaPredicted RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 PCDHGB5Q9Y5G0 923 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 LIPGQ9Y5X9 500 aa13.86□□□□□ -0.19
HNF4A-202ENST00000316673 SETXQ7Z333 2677 aaKnown RBP13.86□□□□□ -0.19
HNF4A-202ENST00000316673 SHANK1Q9Y566 2161 aa13.85□□□□□ -0.19
HNF4A-202ENST00000316673 CLCA1A8K7I4 914 aa13.85□□□□□ -0.19
HNF4A-202ENST00000316673 BLOC1S5-TXNDC5H3BN57 136 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms